Gene Daci_0678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0678 
Symbol 
ID5746232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp752592 
End bp753830 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content65% 
IMG OID641295758 
Producthypothetical protein 
Protein accessionYP_001561709 
Protein GI160896127 
COG category[S] Function unknown 
COG ID[COG1690] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGAGA ACAGCACCAT GAACAACTAC CAACAGCATG ATGTCGAGGG CGGCGTCCCC 
ATCAAGATGT GGACCAAGGG CGTGCCCGTG GAGGACGAGG CGCGCAAGCA GCTGGAGAAC
GCCGCGCGCC TGCCCGTGGT GTTCAAGCAT GTCGCGGCCA TGCCCGACGT GCACCTGGGC
ATAGGCGCGA CCGTGGGCTC GGTGATCCCG ACCATCAAGG CCATCATCCC GGCGGCCGTG
GGCGTGGACA TCGGCTGCGG AATGATGGCC GCCAAGACCA CGCTGCGCGC CGAGGACCTG
CCCGACAACC TGGGCCCGCT GCGCTCGGCG ATAGAGCAGG CCGTGCCGCA TGGCTCGGTG
CCGCGCCACC GGGGCCGTGA TCCCGGCAGC TGGGAGAACC CGCCCGTGTC GGTGGACCAG
GTCTGGGCCA CGCTGGCCGA TGAGTTCGAC CTGCTGTGCG AGCTGCATCC GCGCCTGGCC
AACACCAACA ACCGCAAGCA CCTGGGAACG CTGGGCAGTG GCAACCACTT CATCGAGATC
TGCCTGGACG AGGCGGGCTT CGTGTGGTTC ATGCTGCACT CGGGCTCGCG CGGCGTGGGC
AATGCCATCG GCACCCATTT CATCGAGCTG GCCAAGAAGG ATGCAGAACT CCATCAGCGC
AACCTGCCCG ACAAGGATCT GGCCTATTTC GAGGAAGGGG CCCGCTACTT TGGCGACTAT
GTGCGCGGCG TGTCCTGGGC GCAGAAGTTC GCCATGCGCA ACCGCGAGGT GATGATGGCC
AACCTCATCG CCACGGTGCG CAAGGTGATC GCCAAGCCCT TCGAGTCGCA TGTGGAGGCG
GTGAACTGCC ACCACAACTA TGTGCAGCAG GAGCGCCATT TCGGCCAGGA CGTGTTCATC
ACCCGCAAGG GCGCGGTGAG CGCGCGGCGC GGCGAGCTGG GCATCATCCC GGGCAGCATG
GGCGCGCGCA GCTATATCGT GCGCGGCCTG GGCAATCCGG AGAGCTTCGA GAGCTGCAGC
CACGGTGCGG GCCGCGTGAT GAGCCGGACC AAGGCCAAGA AGATGTTCAG CGTGGAGGAC
CACATCAAGG CCACCGAGGG CGTGGAATGC CGCAAGGATG CCAATGTGGT GGACGAGATT
CCCATGGCCT ACAAGGACAT CGATGCGGTC ATGGCCGCGC AGCAGGATCT GGTGGAGGTG
GTGCACACCC TGAAGCAAGT GGTGTGCGTG AAAGGATAG
 
Protein sequence
MKENSTMNNY QQHDVEGGVP IKMWTKGVPV EDEARKQLEN AARLPVVFKH VAAMPDVHLG 
IGATVGSVIP TIKAIIPAAV GVDIGCGMMA AKTTLRAEDL PDNLGPLRSA IEQAVPHGSV
PRHRGRDPGS WENPPVSVDQ VWATLADEFD LLCELHPRLA NTNNRKHLGT LGSGNHFIEI
CLDEAGFVWF MLHSGSRGVG NAIGTHFIEL AKKDAELHQR NLPDKDLAYF EEGARYFGDY
VRGVSWAQKF AMRNREVMMA NLIATVRKVI AKPFESHVEA VNCHHNYVQQ ERHFGQDVFI
TRKGAVSARR GELGIIPGSM GARSYIVRGL GNPESFESCS HGAGRVMSRT KAKKMFSVED
HIKATEGVEC RKDANVVDEI PMAYKDIDAV MAAQQDLVEV VHTLKQVVCV KG