Gene Daci_0628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0628 
Symbol 
ID5746171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp693930 
End bp694712 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content65% 
IMG OID641295697 
Productflagellar basal-body rod protein FlgG 
Protein accessionYP_001561659 
Protein GI160896077 
COG category[N] Cell motility 
COG ID[COG4786] Flagellar basal body rod protein 
TIGRFAM ID[TIGR02488] flagellar basal-body rod protein FlgG, Gram-negative bacteria
[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAATT CGCTGTTCAT CTCCAAGACC GGCATGGAAG CCCAGCAGAC CCAGCTGGAT 
GTGATCTCCC ACAACCTGGC CAACGTCTCG ACCACGGGCT ACAAGCGCGC CAGCGCGGTG
TTCGAGGATC TGATCTACCA GAACCTGCGC CAGTCGGGCG CCCAGACCAC CGAGCAGAAC
CAGCTGCCCA CGGGTCTGCA CCTGGGCCTG GGCGTGCGCA CGGTGGCCAC CTCGCGCAAT
TTCCTGCAGG GCGCCCTGCA GCAGTCCAAC AATGCGCTGG ACGTGGCCAT CGACGGCAAC
GGCTTCTTCC AGGTCAACAT GCCCGACGGC ACCACGGCCT ATACCCGCGA CGGCTCCTTC
CAGGTCGATG CCCAGGGCCA GCTGGTGACT GCCAGCGGCA TGCCCATCGC CAACGGCGTC
ACCATTCCCC AGGGCGCAAC CAAGGTGTCG ATCAGCCCCG AGGGCGTGGT CAGCGTGACC
ATGGCCGGCC AGGCCGCGCC CCAGCAGGTG GGCAACATCG CGATGAGCCA GTTCATCAAT
CCGGCCGGCC TGGAGCCGCG CGGCCAGAAC CTGTTCACGG AAACCGCTTC CTCGGGCCAG
CCCCAGCAGG GCCAGCCCGG TGTCAACGGC ATGGGCATGA TCAAGCAGGG CTACCTGGAA
GGCTCGAACG TGAACGTGGT GCAGGAGCTG GTGACCATGA TCCAGACCCA GCGCGCCTAT
GAAATGAATT CCAAGGCCAT CCAGACGTCG GACCAGATGC TGGCCAAGCT GGCGCAGTTG
TAA
 
Protein sequence
MINSLFISKT GMEAQQTQLD VISHNLANVS TTGYKRASAV FEDLIYQNLR QSGAQTTEQN 
QLPTGLHLGL GVRTVATSRN FLQGALQQSN NALDVAIDGN GFFQVNMPDG TTAYTRDGSF
QVDAQGQLVT ASGMPIANGV TIPQGATKVS ISPEGVVSVT MAGQAAPQQV GNIAMSQFIN
PAGLEPRGQN LFTETASSGQ PQQGQPGVNG MGMIKQGYLE GSNVNVVQEL VTMIQTQRAY
EMNSKAIQTS DQMLAKLAQL