| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0605 |
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| Symbol | |
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| ID | 5746148 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 668623 |
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| End bp | 670284 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641295674 |
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| Product | tetratricopeptide domain-containing protein |
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| Protein accession | YP_001561636 |
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| Protein GI | 160896054 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.335277 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATCTT CACCTCTTGC CAACGCCTTT GCTGCCGCTG CGCAGCCGCC CAGCATCGAC
AGCGAGCTGA CCCGCATCCG CGCCATGGTC GATCGCGCGC AGTTCCTGGA GGCACTGTCG
GATCTGGCGC AACTGGTGGC CCGGGACCCG CGCAACTCCA AGGTCTGGCT GCACATCGGC
TTTGTCTACG TGCGCATGAG CATCTGGCCG CAGGCCATGG AAGCGTTGCA GATGGCCTTG
GAGATAGAGC CTCGCATGCC CAACGCCCAG CGCCTGCTGG CGCTGGCCCT GTTCAGCACG
GGGCGCAGGC AGGAGGCCTG CGACCTGATC GACGACGCCT GCCGCCATGC CAAGAACGAG
AACACGCACT GGATGACGCG GGCCTACATC CACTCGCACA CCAGCAGCGA TCCGCTCAAG
TCGCTGGAAG TGGCGCGTGA CTGGGGCCGG CGCTTCGCCG ACCCGCTGAC CCGCAACGCC
AAGCCCTTTC CGCCGCGCGA TCGCAACCCG CGCAAAAAGC TCAAGGTCGG CTATGTCACG
GCCGACTTCC GCCAGCACTC GGTGGCCTTC TTCATGCGGC CCGTGCTGGA ACACCACAAC
CCGGACAACG TCGAGATCCA CGTCTACTCC AGCGGCCGCC CCGACAAGAT GACCGAGAAG
CTGCGTGCCC TGGTGCCGCA CTGGCACGAT GCGGTCGAGC AGACCGACGA CCAGCTCTAC
GAACAGATCC GCACCGACGG CATCGATGTG CTGGTGGACC TGTCCGGCTT CACCCTGGGC
CACCGCCTGG AAGTCTTCGC CCGCCGCGCC GCACCCGTGC AGGTGACCTG GTTGGGCTAT
ATGCATACGC TGGGGATGAA GGCCATGGAT TACCGGTTGG TGGATCCGTC CATAGCCCCG
CCGGCGCATG CTCCATATTA TTCTGAAAAA CTTTTTCAGA TGCACTGTAT GGCTAGCTAC
TCGCCTCCAG AGTACTCCCC GTTATGCGAA GAGCCACCGA TGCTGCGCAA CGGCTATCCA
ACGCTTATCT CGTTGAACAA TTCGGCCAAG CTCACTGATG AAATGCTTAC GGTTTGGTCG
CGAATACTGC ATGCACGCCA AGATGCTCGG CTGATCATCA TGGTCAAGGA GCATGACCCT
GATTCAGCGC AAGCTCACAT GCAACCGCGT GTTGAAAAAG CCGGAATGCC GATGGACCGT
GTTTCAGTGC TACATCAGCA GCCGCTGGAT AGCTTTATGG AGCTCGGTCA TATAGCCGAT
ATTGCACTTG ATACTCTGCC AATTTCTGGT GGCACAACAA CTTTACATGC TTTATGGATG
GGGTTGCAGA TCGTAACTAT GGATGCAGTA CGAGGCGTGG ATGCTTCTAC GTCAAGAACC
TTGCGCGGCT TGGGTTTTGA TGGTGGTATC GCAAAGAATA TAGATGACTA TGTGCAGATC
GTGCTGCACC TTATGAAGAG TCCGGATACT TTGGCATCGC AGCGCCGGGA AGCTCGTGCA
CGCCTTGAAT CCAGCTTCTT GATGAACTAT CCAGAGCGTA CAGCGGAACT TGATAAATCA
TATCGACTAA TGTGGATTAA TTGGCTGCGA GAAGACTGCC AGATTTTGGA TGCAGGGAAA
GATCTCGAGC AGTTGCTGAA GAAGATGGAC TCTGAAGTAT GA
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| Protein sequence | MPSSPLANAF AAAAQPPSID SELTRIRAMV DRAQFLEALS DLAQLVARDP RNSKVWLHIG
FVYVRMSIWP QAMEALQMAL EIEPRMPNAQ RLLALALFST GRRQEACDLI DDACRHAKNE
NTHWMTRAYI HSHTSSDPLK SLEVARDWGR RFADPLTRNA KPFPPRDRNP RKKLKVGYVT
ADFRQHSVAF FMRPVLEHHN PDNVEIHVYS SGRPDKMTEK LRALVPHWHD AVEQTDDQLY
EQIRTDGIDV LVDLSGFTLG HRLEVFARRA APVQVTWLGY MHTLGMKAMD YRLVDPSIAP
PAHAPYYSEK LFQMHCMASY SPPEYSPLCE EPPMLRNGYP TLISLNNSAK LTDEMLTVWS
RILHARQDAR LIIMVKEHDP DSAQAHMQPR VEKAGMPMDR VSVLHQQPLD SFMELGHIAD
IALDTLPISG GTTTLHALWM GLQIVTMDAV RGVDASTSRT LRGLGFDGGI AKNIDDYVQI
VLHLMKSPDT LASQRREARA RLESSFLMNY PERTAELDKS YRLMWINWLR EDCQILDAGK
DLEQLLKKMD SEV
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