Gene Daci_0585 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0585 
Symbol 
ID5746128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp644553 
End bp645824 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content72% 
IMG OID641295654 
ProductNa+/H+ antiporter NhaA 
Protein accessionYP_001561616 
Protein GI160896034 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3004] Na+/H+ antiporter 
TIGRFAM ID[TIGR00773] Na+/H+ antiporter NhaA 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCT ACACGACCCC GCGGCCGTCC GGCCCGCGCA CGCCCCTTTT CCTGTCTTTC 
GCCGATCGCG TCGGCGCCTT CCTGTCCCGC TGGTCCCATG CCGAGGCTGC GGGCGGCATC
GTGCTGCTGC TGGCAGCGGC CGCCGCCCTG CTCTGGGCGA ACTCCGGCTG GGCCGGCTCC
TATGAGGCGC TGTGGCACAC GCCGCTGAGC CTGGGCCTGG GCCCGTGGCA GCTGTCGCAA
TCCCTGCATT TCTGGGTCAA CGATGCGCTG ATGAGCGTGT TCTTTCTCGT GGTCGGCATG
GAGATACGCC GTGAGATGCA TTCCGGCGCA CTGGCCCAGC CGCGCCAGGC GCTGCTGCCC
GTGATGGCCG CGCTGGGCGG CGTTGTGGCG CCGGCCCTGA TCTTCCTGGC CTTCAATGCC
GCGCCGCCGC TGCGCAACGG CTGGGCCGTG CCCACGGCCA CCGACATCGC CTTTGCCATG
GGCGTGCTGG CCCTGCTGGG CCGGGGCCTG CCGCCCGCGC TGCGCGTGTT CCTGCTGGCG
CTGGCCATCA TCGACGACCT GGTGGCCGTG CTCATCATTG CGCTGTTCTA TTCGGGCGGG
CTGCAGTGGA GCCAGCTGCT GGTGGCCGCC GCCGGCCTGG CCGGCGTGTT CCTGCTGCAG
TCGCTGGGCG TGCGCCGCGC CTGGGCCTAT GTGCTGCCGG GCGCCGTGCT CTGGTGGGGC
ATCTGGCAGA CCGGCGCCCA TCCCACGCTG GCCGGCGTGG TGCTGGGCCT GGTGACGCCC
GTGCACGCAC TGGCAGGCCG CGAAAGCGCC GCGCCCGTGG AGCGCGTGCA GGCGGACCTG
CATCCCTGGG TGGCCTTTGG CGTGATGCCG CTGTTTGCGC TGGCCAATGC CGGCGTGCCG
CTGCAGGGCG CGGGCACCGC TGGCATTGAT GTGGCGGGCA CGTCGGCCGT GATGTGGGGC
GTGGCCCTGG CCCTGGTACT GGGCAAGCCG CTGGGCGTGC TGCTCAGCTG CTGGCTGGCC
GTACGCCTGC GGATGTGCGC GCTGCCGCCA GGCATGGGCT GGGGCGACAC GCTGCTGGCA
GGCCTGCTGG CAGGCATTGG CTTCACCATG GCCATCTTCA TCGCCACGCT GGCCTTTGAC
AGCGAGGCCC TGCTCAATGC CGCCAAGCTG GGGGTGCTGA TGGCCTCGGC CACGGCCGCC
GTGCTGGGCC TGGCCTGGGG CCTGGTGCTG CGCCGCCGCC ATGCTGCGTC CGCGACAGTG
CAGCCGGCCT GA
 
Protein sequence
MNTYTTPRPS GPRTPLFLSF ADRVGAFLSR WSHAEAAGGI VLLLAAAAAL LWANSGWAGS 
YEALWHTPLS LGLGPWQLSQ SLHFWVNDAL MSVFFLVVGM EIRREMHSGA LAQPRQALLP
VMAALGGVVA PALIFLAFNA APPLRNGWAV PTATDIAFAM GVLALLGRGL PPALRVFLLA
LAIIDDLVAV LIIALFYSGG LQWSQLLVAA AGLAGVFLLQ SLGVRRAWAY VLPGAVLWWG
IWQTGAHPTL AGVVLGLVTP VHALAGRESA APVERVQADL HPWVAFGVMP LFALANAGVP
LQGAGTAGID VAGTSAVMWG VALALVLGKP LGVLLSCWLA VRLRMCALPP GMGWGDTLLA
GLLAGIGFTM AIFIATLAFD SEALLNAAKL GVLMASATAA VLGLAWGLVL RRRHAASATV
QPA