| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0572 |
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| Symbol | |
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| ID | 5746115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 627541 |
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| End bp | 628692 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641295641 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_001561603 |
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| Protein GI | 160896021 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.199084 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGTT TGACGAAACT GGGCCTGCTG GCCGCGACCC TGGCCACGGT CTGGGGCTCG
GCCCTGGCCG ACATCAATGT GGGCGTGGTG GTCTCGGCCA CCGGACCGGC CGCCTCCCTG
GGCATTCCCG AGAAGAACAC CGTGGCGCTG ATGCCGCGCA CGGTGGCGGG CCAGAAGGTC
AACTACATCA TCCTGGACGA CGCATCCGAC ACCACGGCGG CCGTGGCCAA CACGCGCAAG
CTGATCAGCG AGAGCAAGGT CGATGTCATC CTGGGCTCCA GCATCACGCC CAACTCGCTG
GCCATGGTGG ACGTGGTCTC CGAGGCCAAG ACGCCCATGA TCACGCTGGC GGCCTCGGCC
AAGATCGTCG AGCCCGTGGA TGCCAAGAAG TTCTGGGTCT TCAAGACGCC CCAGCACGAC
GCCATGATGG CCGCCGCCAT CGGCGAGCAC ATGGCCAAGG CCGGCATCAA GACCGTGGGC
TACATCGGCT TCAACGACGC CTATGGAGAA AGCTGGCTGC AGGAGTTCCG CAAGGTGGCC
GAGGCCAAGG GCCTCAAGCT CACCGCCACC GAGGCCTATT CGCGCAGCGA TACCTCGGTC
ACGGGCCAGA CGCTCAAGCT CATGTCCGCC AAGCCCGATG CGGTGCTGAT CGCAGGCTCG
GGCACGCCGG CCGCGCTGCC GCAGAAATCG CTCAAGGAGC GCGGCTACCA GGGCAAGATC
TACCAGACCC ACGGCGTGGC CAATGCCGAC TTCCTGCGCG TGGGCGGCAA GGATGTGGAA
GGCACGCTGC TGCCCGCCGG CCCCGTGCTG GTGGCCCACC AGCTGCCCGA CAGCAACCCG
GTCAAGAAGT CTGCCGTCTC CTATGTGGAG GCCTACGAGG CCGCCAACGG CAAGGGCACG
GCATCGACCT TTGGCGCGCA TTCCTGGGAT GCGGGCCGCG TGCTCGAAGC GGCGATTCCC
GCCGCGCTCA AGAAGGCCCA GCCCGGCACG GCCGAGTTCC GCGCCGCCCT GCGCGATGCG
CTGGAGCAGA CCAAGGACGT GGCCGGTGCC CACGGCATCT TCAACATGAC GCCCACCGAC
CACCTGGGCC TGGACCAGCG CGCGGCCGTC ATGGTCAAGA TCGAGAACGG CACCTGGAAG
TACCAGCCCT GA
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| Protein sequence | MKRLTKLGLL AATLATVWGS ALADINVGVV VSATGPAASL GIPEKNTVAL MPRTVAGQKV
NYIILDDASD TTAAVANTRK LISESKVDVI LGSSITPNSL AMVDVVSEAK TPMITLAASA
KIVEPVDAKK FWVFKTPQHD AMMAAAIGEH MAKAGIKTVG YIGFNDAYGE SWLQEFRKVA
EAKGLKLTAT EAYSRSDTSV TGQTLKLMSA KPDAVLIAGS GTPAALPQKS LKERGYQGKI
YQTHGVANAD FLRVGGKDVE GTLLPAGPVL VAHQLPDSNP VKKSAVSYVE AYEAANGKGT
ASTFGAHSWD AGRVLEAAIP AALKKAQPGT AEFRAALRDA LEQTKDVAGA HGIFNMTPTD
HLGLDQRAAV MVKIENGTWK YQP
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