| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0547 |
|---|
| Symbol | |
|---|
| ID | 5746090 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 601390 |
|---|
| End bp | 602520 |
|---|
| Gene Length | 1131 bp |
|---|
| Protein Length | 376 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641295616 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001561578 |
|---|
| Protein GI | 160895996 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.22881 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAGCA CCGTAGACCA AGTCACCCAG CGCCGCCGCG GCGTCGGACT CATCGCCCAC
GACCCCGCCC TCTCGGCCGG CGGCTACACC CTGATCGCGC CGCAGACGGC CGACGGCCAT
GTCTACCTGG TGGACATCGA AGGCCGCGTG GCCCATGAAT GGAAGCTGCC CGTGCGCGCG
GGCCGGCACG CCGTGATCCT GCCCAACGGC AACCTGGGCT ACAACGGCAA CCACCCCCGC
TCGCCAGACC GCTATGCGCC GTGGTCCATG TGGCATGGTG GCGATTTCTA CGAGGTCACG
CCGCAGGGCG AGATCGTCTG GCGCCACGAG GACCCGGACC ACCACCATGA CGCGCAGTGG
CTGCCCAACG GCCATCTGCT CTACGCCGCC TGCGCGCCCG TGCCTGCGGG CTTTGCCGAG
CGCGTGCCCG GCGGCACCGC GCACGGGCCC GGCGAGGTGA TGTACGGCGA CGTGATCCGC
GAAGTGGACC GCAGCGGCCG CCTGGTCTGG GAATGGAAGG CCTGGGAGCA TCTGGCGCCC
GAGGACTTCC CTATTCACCC GGGCTTCGGC CGCTACCACT GGCCGCTGGT CAACGGGCTG
GGCGTGAGGG CCGACGGCAG CGTGCTCATG AGCCTGCGCA CCACCTCCGG CATCATTGCC
GTGGACAAGG CCAGCGGCGC GGTGAAGCTG CACATTCCGC CCTCCGTGGT CTCGCACCAG
CATGCGCCCG TGGCGCTGGA CAACGGCCAC ATCCTGGCCT TCGACAACGG CAACTTCCGC
GAAGGCGCCC ATGTGGCCTT CTCGCGTGTG GTGGAGATCG ATCCTGCCGA CCACCGCGTG
GTCTGGAGCT ACCAGGACGA GATGGTCAAC GCCTTCTACA CCGCCTTCAT GGGCAATGCC
CAGCGCCTGT GGAACGGCAA CACCCACATC ACCGAATCGG CCACGGGCCG GCTCTTCGAG
GTCACGCCTG CGGGGGAGGT GGTCTGGGAA TACATCCTGC CCTGGTTCGC CGAGTACCCC
GATGCCGCAG CGCGCCGCAC CGGCCCCGGA CGGCTCAACA GCGTGTTCCA GACCTGGCGC
TACCACGCGG ACCAGCTGCC CTGGCTGGGT GCCGCCGGGA GGCTGTCATG A
|
|---|
| Protein sequence | MASTVDQVTQ RRRGVGLIAH DPALSAGGYT LIAPQTADGH VYLVDIEGRV AHEWKLPVRA
GRHAVILPNG NLGYNGNHPR SPDRYAPWSM WHGGDFYEVT PQGEIVWRHE DPDHHHDAQW
LPNGHLLYAA CAPVPAGFAE RVPGGTAHGP GEVMYGDVIR EVDRSGRLVW EWKAWEHLAP
EDFPIHPGFG RYHWPLVNGL GVRADGSVLM SLRTTSGIIA VDKASGAVKL HIPPSVVSHQ
HAPVALDNGH ILAFDNGNFR EGAHVAFSRV VEIDPADHRV VWSYQDEMVN AFYTAFMGNA
QRLWNGNTHI TESATGRLFE VTPAGEVVWE YILPWFAEYP DAAARRTGPG RLNSVFQTWR
YHADQLPWLG AAGRLS
|
|---|
| |