Gene Daci_0502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0502 
Symbol 
ID5746039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp533152 
End bp533817 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content64% 
IMG OID641295565 
ProductTetR family transcriptional regulator 
Protein accessionYP_001561533 
Protein GI160895951 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGGC TCAACGATGG AAGGAAATAC ATCTTGGCAC GACGAACGAA AGAAGATGCG 
TTTGCAACGC GCAACAGTCT GCTGGACGCT GCGGAGCAAG TGTTCTACGA ACAGGGTGTC
GCCCGGGCCT CGCTCAACGA GATTGCCCAG CGAGCCGGCG CCACGCGCGG TGCGGTCTAC
TGGCATTTCA AGGACAAGCT GGATCTCTTC TACGCCATGC TGGACCGCGT CACGCTCCCG
CTGGAGCAGG CGGTCTACAG CGACTGCGAG GACGATTCGG AGTGCGATGC ACTGGAATAT
GTGCGGCGCC TGATGGCTGT GGTCTTCGGG CGCATCGCCG ATGACGACAG CACGCGGCGC
GTCTTCGAGA TCCTGCTGCT CAAGGTGGAA TACGTGGGCG AGCTCATGCC CGTGCAGGAG
CGCAACCGTG CCGCACTGGA CTCTTTTTCC GCGCAACTGG AGCTGGCGCT GCGCGCGGCT
GCCGAAAGCC ATGCGGTGAC CATGTCCATG CCGGCTCCCC AGGCCTCGAT CGCGCTGTGC
GCCATGTTCG ATGGCCTGTT GCAGAGCTGG CTGCTGGGAA GGGCCTTCGA TCTCAAGCAG
GTGGGCGCGC AGGCGGTGGA TGTCTGCCTG CGGGGGTTGG GCTTCACGGT GCCGCAGGCG
CAATAG
 
Protein sequence
MAGLNDGRKY ILARRTKEDA FATRNSLLDA AEQVFYEQGV ARASLNEIAQ RAGATRGAVY 
WHFKDKLDLF YAMLDRVTLP LEQAVYSDCE DDSECDALEY VRRLMAVVFG RIADDDSTRR
VFEILLLKVE YVGELMPVQE RNRAALDSFS AQLELALRAA AESHAVTMSM PAPQASIALC
AMFDGLLQSW LLGRAFDLKQ VGAQAVDVCL RGLGFTVPQA Q