| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0482 |
|---|
| Symbol | |
|---|
| ID | 5746019 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 514575 |
|---|
| End bp | 516524 |
|---|
| Gene Length | 1950 bp |
|---|
| Protein Length | 649 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641295545 |
|---|
| Product | iron permease FTR1 |
|---|
| Protein accession | YP_001561513 |
|---|
| Protein GI | 160895931 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0672] High-affinity Fe2+/Pb2+ permease |
|---|
| TIGRFAM ID | [TIGR00145] FTR1 family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATGC TTTCTCTTTG CGCCAGGCGA TTCCTGGCAA TAGCCGCGTT GTTCGCACTC
TGGTCGGCTT CTCCCGCCTG GGCTGCCGCC CCTGCCGCCA GCGACCAGGC CAAGCAGACC
TGGCAATTGC TGGACTACCT CGCGGTTGAC TACGGCGGCG CGGTGAGCAA CGGCCAGATT
CAAAGTGCCA GCGAGTACGA GGAGATGAAG GAGTTCGCGG CAACCGCCGC ACAGCAGCTT
GCCGCACTGC CGAGCACTGC GGCGCTGCCC GAGTTGCAGC GGCAGGCCAA AGCGCTCGGA
GACCTCATCG CCGCAAAGGC GGACGCCAAG GCCGTGGCCG ACAGCGCCCA TTCGCTGGCC
GCAGCGCTGG TCAAAGCCTA TCCGTTTCCG CTCTCGCCGA CCCAGCCGCC GGATCTCGCA
CGCGCCAAGG TGCTGTTTGA AGCCAACTGC GCGGCATGCC ACGGGGCAAC CGGTGCAGGC
GACGGCCCGC TCGGCGCCAA GCTCGAACCG CCGCCGATCG CCTTCACCGA TCGTGATCGT
GCCCGTTCGC GCAGCGTGCT CGCGCTGTAC CAGGTCATTT CTCAAGGCGT GACCAGCACG
TCGATGCCCA GCTTCGCCAC GCTCTCCGAC GAGGATCGGT GGGCATTGGC ATTTTTCGCC
GGCACACTGT CGCATGACGA TGCCATGCGC GCACGCGGCG AACAGTCCTG GGGGCGAGAC
GCCAGCGCCA AGGCTGTCTT TCCCGACCTG GCTGCTGCCG CCACCTTGAC CGAAGCCGCC
TTGTCCGAGC GGATGCCCCC GGACGCAGCC CGCGACCTCA CCGCCTATGT TCGCCGCCAC
CCGGAAGTCA CCGCTGCCGC GAGCGGCTCG GGCGGACTGG CCTTGGCCCG CACACGCCTT
CAGGAGAGCC TTGCCGCGGC GCGCGCGGGC GACCGGGCCA GCGCAACGCG CCTGGGCCTG
TCGGCCTACC TGGATGGATT TGAGCCTCTG GAGCCGGCAT TGCGCGCACG CAACCAGACA
CTTCTCACGG AAGTCGAAAA CGCCATGCTG GCCTATCGCG GCGCGCTCGC CGGCGGGAAA
CTGGAACAAG CCGATGCCAC GGCGCAGAAG CTGGACTATC TCTTTGCCCA GGTGGACGCC
GAACTCGGCG CGGACAAGGC AGACCCGCTG ACCACGTTCA TCGCCTCCCT CACCATCCTG
CTGCGCGAAG GGGTTGAAGC GCTGTTGATC GTCGTGGGCA TGCTGGCCTT CCTGAAGAAG
GCAGAACGGC GCGATGTGCT GGGCTATGTG CATGGCGGCT GGATGGCCGC ACTGGCTTGC
GGTGGCCTGA CCTGGGCGGT GGCCACCTAC TTCGTGAGCA TCAGCGGCGC AAGCCGTGAG
GTGACCGAGG GGGTTTCATC CCTGTTTGCG GCCGTTGTGC TGCTGAGCGT CGGGCTCTGG
ATGCACCAGA AAAGCACGGC GGGCAAGTGG CAGGCCTACC TGAAGGAAAA ACTCTCCGCA
GCCATGACGC GGCGTTCGGC ATGGGCATTG TTCGCCTTGT CGTTCATTGC GGTCTACCGC
GAAGTTTTCG AGACGGTGCT TTTCTATTCG GCCCTGGCCG GCGACGGCAA CAATGGAGCC
CTGCTCGGTG GATTGGTGGG CGGAGTGGCC GTTCTGGCCG TCCTCGCATG GTTCATGCTG
CGCACCAGCG CCCGCATGCC GATCGGCAAA TTCTTCAGTC TCAGCTCGAT CCTGGTAGCG
GTGCTCGCGG TCGTGCTCGC CGGCAAGGGG GTTGCCGGCC TCCAGGAGGC CGGCCGGTTG
AGCGCCAGCC CGATCCATTG GCCGCGCATC GAAGTGCTTG GCATCTATCC GTCAGCGGAA
ACCGCCATTG CGCAAGCCGT GGTGCTTGCC GTTGCTCTGG CAGGCTTTGC CATGAACGCC
GTGAAGGCGC GAAATCCCCG GCCCGCGTGA
|
|---|
| Protein sequence | MKMLSLCARR FLAIAALFAL WSASPAWAAA PAASDQAKQT WQLLDYLAVD YGGAVSNGQI
QSASEYEEMK EFAATAAQQL AALPSTAALP ELQRQAKALG DLIAAKADAK AVADSAHSLA
AALVKAYPFP LSPTQPPDLA RAKVLFEANC AACHGATGAG DGPLGAKLEP PPIAFTDRDR
ARSRSVLALY QVISQGVTST SMPSFATLSD EDRWALAFFA GTLSHDDAMR ARGEQSWGRD
ASAKAVFPDL AAAATLTEAA LSERMPPDAA RDLTAYVRRH PEVTAAASGS GGLALARTRL
QESLAAARAG DRASATRLGL SAYLDGFEPL EPALRARNQT LLTEVENAML AYRGALAGGK
LEQADATAQK LDYLFAQVDA ELGADKADPL TTFIASLTIL LREGVEALLI VVGMLAFLKK
AERRDVLGYV HGGWMAALAC GGLTWAVATY FVSISGASRE VTEGVSSLFA AVVLLSVGLW
MHQKSTAGKW QAYLKEKLSA AMTRRSAWAL FALSFIAVYR EVFETVLFYS ALAGDGNNGA
LLGGLVGGVA VLAVLAWFML RTSARMPIGK FFSLSSILVA VLAVVLAGKG VAGLQEAGRL
SASPIHWPRI EVLGIYPSAE TAIAQAVVLA VALAGFAMNA VKARNPRPA
|
|---|
| |