| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0474 |
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| Symbol | |
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| ID | 5746011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 505149 |
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| End bp | 506786 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641295537 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001561505 |
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| Protein GI | 160895923 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0677608 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCA AAAACCTCGT GATGGCCCTC GTCGCCGCCG GCGTGCTGGG CGCCGCCGGC
TACGGCCTCT ACACCCTCGG CATGCGCCAC GGAGCCGACA TGCCGGCCAC GCCTTCGAAT
CCCAGTGGCA TGGCATCGCC GCAAGCGGCG ACTCCCGCTG TTGCTGCGCC TGCCAATGAG
TCGGGCGAGG ACGCCACGCG GCGGCATATC GCGGCCGGCC TCAAGGCCGG CGACGTCGAT
CCCGCCAATG GCAAGAAGAT CCTGTACTAC AACGATCCCA TGGTACCGGC GAACAAGTTC
GACAAGCCGG GCAAGTCACC CTTCATGGAC ATGATGATGT CGCCGGTCTA CGCCGACGGC
GATGCGGACC AGGGCAAGGT CACCGTCAGC TCGCGCATCC AGCAGAACCT CGGCGTGCGA
ACCGCTGAAG TGACCGAAGG CACGCTGTCG CCGCAGCTGT CCGCTGTTGG CAGCATCGCT
TTCAACGAGC GCGACCAGGC GATCGTGCAG GCGCGTGCCA CCGGCTATGT CGAGCGCCTG
CACGTGCGCG CCACGCTGGA CCCGGTTGCC AAAGGGCAGC CCTTGGTCAG CCTTTATGTC
CCGGACTGGA TTGCTGCGCA GGAAGAGTTC CTGTCGGTAC GGCGCATGAA AGGCACGGAC
CTGGGTGGAC TCGTGGACGG TGCGCGCCAG CGCATGCGTC AGGTTGGCAT GGACGATGCC
CAGATCGCGC TGGTCGAGCG CAGCGGCCAG ACCCAGCCGC GCATCACGCT GAGCGCGCCC
CTCGGCGGAG TGGCGGTCGA AGTGCTGGCG CGCGAAGGCA TGACGGTGGC GCCGGGTGCG
ACGCTGTTCC GCATCAACAG CCTTTCCACC GTATGGGCCA ACGCCGAGGT GCCGGAGAGC
CAGGCCGCGC TGCTGCGACC GGGCGCCAAG GTGCAGGCCA GAAGCCCGGC CGCGCCCGGC
AGCAGCTTCG ATGGCAAGGT GCAGGCGATC CTGCCCGAGG TGAACCCGAG CACGCGCACG
CTGAAGGCGC GCATGGAGCT TGCCAACCCG GGCGGCCGGC TGGTGCCGGG CATGTTCGTG
ACGATGAACT TCGTGGACAT GCGCCCCGAC AAGACGCTGC TCGTGCCTAC CGAGGCGGTG
ATCCAGACCG GCAAACGCAC GGTCGTGATC GTGGCCGAAG ACAACGGGCG CTTCCGTCCC
GCCGAAGTCG ATGCCGGTAT CGAGAGCGGT GGCCAGACCG AGATCAAGCA CGGCCTCTCG
GCCGGCCAGC GCGTGGTCGT GTCGTCGCAA TTCCTGATCG ATTCGGAGGC CAGCCTCAAG
GGCGTCGAAG CCCGCCTGAA CAGCGCGCCG TCGGCGGTGG CAGCAGCTTC ACCGCCGGTC
CCGATGGCCG CCAGCGCGCC GCGGCATTCC GGTGAGGCCA AGGTCGTCGG CATCGGCAAG
GACGCGCTGA CCCTGTCGCA CGGTGCGATC CCCACGCTGA AATGGGGCCC GATGACGATG
GATTTCAAGC TGCCGCCTGA CGGCTCGGCA CCCAAGGTGC AGGTCGGCGA CCGCGTGAGC
TTCGAGTTCT TCATGGGCGC GGACGACCTG CCGCAACTCA CTCGCGTCAC GCCGATGGCG
GCCGGAGGCA AGCCATGA
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| Protein sequence | MKTKNLVMAL VAAGVLGAAG YGLYTLGMRH GADMPATPSN PSGMASPQAA TPAVAAPANE
SGEDATRRHI AAGLKAGDVD PANGKKILYY NDPMVPANKF DKPGKSPFMD MMMSPVYADG
DADQGKVTVS SRIQQNLGVR TAEVTEGTLS PQLSAVGSIA FNERDQAIVQ ARATGYVERL
HVRATLDPVA KGQPLVSLYV PDWIAAQEEF LSVRRMKGTD LGGLVDGARQ RMRQVGMDDA
QIALVERSGQ TQPRITLSAP LGGVAVEVLA REGMTVAPGA TLFRINSLST VWANAEVPES
QAALLRPGAK VQARSPAAPG SSFDGKVQAI LPEVNPSTRT LKARMELANP GGRLVPGMFV
TMNFVDMRPD KTLLVPTEAV IQTGKRTVVI VAEDNGRFRP AEVDAGIESG GQTEIKHGLS
AGQRVVVSSQ FLIDSEASLK GVEARLNSAP SAVAAASPPV PMAASAPRHS GEAKVVGIGK
DALTLSHGAI PTLKWGPMTM DFKLPPDGSA PKVQVGDRVS FEFFMGADDL PQLTRVTPMA
AGGKP
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