Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_0473 |
Symbol | |
ID | 5746010 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 501982 |
End bp | 505152 |
Gene Length | 3171 bp |
Protein Length | 1056 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641295536 |
Product | CzcA family heavy metal efflux protein |
Protein accession | YP_001561504 |
Protein GI | 160895922 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3696] Putative silver efflux pump |
TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.39068 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGCCA AGCTGATCCG CTGGTCCATC GCCAACCGCT TCCTCGTGCT GCTGGCCACC GTGGCGCTCA GCGCCTGGGG CATCTATGCG GTGCAACGCA CACCGCTGGA TGCGCTGCCC GACCTGTCGG ACGTGCAGGT CATCATCCGC ACCACCTATC CGGGTCAGGC GCCGCGCATC GTCGAGAACC AGGTCACGTA CCCGCTGACC ACGACGATGC TTTCGGTGCC GGGGGCCAAG GCGGTGCGCG GCTACTCGTT CTTTGGCGAC TCCTTTGTCT ACGTGCTGTT CGAGGACGGA ACCGACCCAT ACTGGGCGCG CTCCCGGGTG CTCGAATACC TGAACCAGGT GCAGTCGAGA TTGCCCGCCC AGGCCAAAGC CTCATTGGGT CCAGACGCGA CCGGCGTCGG TTGGATCTAC GAGTATGCGT TGATCGACCG CAGCGGCAAG ATGGACATCT CGCAACTGCG CGCGCTGCAG GACTGGTTTC TCAAGTACGA GCTGAAGACC GTGCCCGACG TGGCCGAGGT CGCTTCCGTG GGCGGCATGG TGCGCCAGTA CCAGATCGTG CTCGATCCGG ACAAGCTTGC GGCCTACGGC ATCCCGCACA CCAAGGTCGT GGAGGCGATC CAGCGCGCGA ACCAGGAGAC GGGCGGCTCG GTGCTCGAAC TCGGCGAGGC CGAGTACATG GTGCGCGCCT CGGGCTACCT GGGGAGCCTG GAAGATTTTA GGAAGGTGCC GCTCATGACG ACAGCCGCCG GCGTGTCGGT GCGTCTGGGC GACGTAGCGC GGGTGCAGAT CGGTCCGGAA ATGCGGCGCG GCATCGGCGA ACTCAACGGC GAGGGAGAGG CCGTCGGCGG CGTGATCGTG ATGCGCTCGG GAAAGAACGC GCTGCAGACC ATTGCTGCGG TCAAGGGCAA GCTCCAGGGC CTGGCGTCCA GCCTGCCGCG AGGTGTGGAG ATCGTGCCGG TCTACGACCG CTCGGGGCTG ATCGAACGCG CAGTGGAGAA CCTCACGCAC AAGCTGATTG AGGAATTCAT CGTCGTTGCG GTGGTCTGCT TCCTCTTCCT GTTCCACCTG CGCTCGGCGC TGGTCGCCAT CATCTCGCTG CCCCTGGGCA TCCTGGCGGC GTTCATCGTG ATGCACTACC AGGGCGTCAA CGCCAACATC ATGTCGCTGG GGGGCATCGC GATCGCCATC GGTGCGATGG TCGACGCGGC GGTGGTGATG ATCGAGAACG CCCATAAGCA TCTGGAGCAT TGGGGCCATG AACACCCTGG CGAGACGCTT GAAGGGACGG CCCGATGGCA CGTCATCGGC GAATCGGCGG CGGAGGTGGG GCCGGCGCTG TTTTTCTCGC TGCTGATCAT CACGCTGTCC TTCGTGCCTG TGTTCACACT GGAAGCGCAG GAAGGACGCC TGTTCTCCCC GCTGGCGTTC ACCAAGACCT ACGCCATGGC GGCTGCGGCA GGCCTGTCGG TGACCCTGAT CCCGGTGCTC ATGGGCTACC TGGTCCGTGG CCGCATCCCC GACGAGAAGA ACAATCCGCT CAATCGCCTG CTGATCGCGG TCTACCGGCC GCTGCTCGAC AGGGTGTTGC GCGCCCCGAA GCTCACGCTC GTGGTGGCGC TCGTGGTGCT GGCTACCAGC TTGTGGCCGC TGCGGCACAT CGGCGGCGAG TTCATGCCGC GGCTGGACGA AGGCGACCTG CTGTACATGC CTTCGGCACT GCCAGGACTG TCGGCAGGGA AAGCGGCCGA GTTGCTGCAG CAGACCGATC GCCTGATCAA GACGGTGCCG GAGGTCGCGA GCGTCTACGG CAAGGCGGGC CGCGCAGAGA GCGCGACCGA CCCCGCGCCG CTGGAGATGT TCGAGACGAC GATCCAATTC AAGCCGCGCG ACCAGTGGCG CGCCGGCATG ACGACCGACA AGCTGGTTGA GGAACTCGAC CGCATCGTCA AGGTGCCGGG CCTGTCCAAC ATCTGGGTGC CGCCGATCCG CAATCGCATC GACATGCTGG CCACGGGCAT CAAGAGTCCG GTGGGTGTCA AGGTGGCGGG CACGGACCTG GCGACCATCG ACCGCCTCAC TGGCGAGATC GAGCGCACGC TCAAGGACGT GCCGGGCGTG AGCAGCGCCC TGGCCGAGCG GCTCACCGGC GGACGCTATG TGGATGTGAA CATCCGGCGC GACGACGCGG CGCGCTATGG GTTGAACATC GCCGACGTGC AGTCGGTGGT TTCATCCGCC GTGGGCGGCG AGAACATCGG CGAGACGGTG GAAGGCCTGC AGCGCTTCCC GATCAACCTG CGCTATCCGC GCGAGATGCG CGATTCGCTG GAAAAGCTGC GCGTCCTGCC CGTGCTGACA GGAAGCGGCC AGCGGCTGGT GCTCTCCGAT GTGGCCGACA TCCGCGTCGC CGACGGGCCG CCGATGCTGC GCAGCGAGAA CGCGCGCCTG TCGGGCTGGG TGTATGTCGA TATCCGGGAT CGGGATCTGC GCTCCGCCGT GCAGGACATG CAGCAGGCCG TCGAAAAGCA AGTGAAGCTG CCGCCGGGCT ACTCGATCTC CTGGTCGGGC CAGTTCGAGT TCCTGGAGCG CGCCACCGCC AAGCTCAAGG TGGTGGTGCC ATTCACGCTG CTCATCATCT TCGTGCTGCT GTACCTGACC TTCGGCGCGT TCGGTGAGGC GCTGCTGATC ATGGCGGCGC TGCCGTTCGC TCTGGTGGGC GGCATCTGGC TGCTGTATCT GCTGGGCTAC AACCTGTCGA TCGCGGGCGC CGTGGGCTTC ATCGCGCTGG CCGGCGTGTC CGCCGAATTC GGCGTGATCA TGCTGCTGTA CCTCAAGAAC GCCTGGCAAG AGCGTGCCGA CCAGGGTAAG ACCAGCGAGG CCGATCTGCT GGATGCCATT CGCGAAGGCG CCGTGCTGCG CGTGCGCCCC AAGGCGATGA CGGTGGCCGT CATCCTGGCC GGCCTGCTGC CGATCATGTG GGGCACGGGA ACAGGCTCGG AGGTGATGCA ACGCATCGCC GCGCCGATGG TGGGCGGGAT GGTCACGGCG CCGTTGCTCT CGATGTTCGT CATTCCCGCG GCCTACCTGT TGATGCGCCG GTCGCGCGAA CGTAAGGCAT CGCCGTGGAT GTTCTGGAGG CGTCATCGTG CGGCCGCTTG A
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Protein sequence | MIAKLIRWSI ANRFLVLLAT VALSAWGIYA VQRTPLDALP DLSDVQVIIR TTYPGQAPRI VENQVTYPLT TTMLSVPGAK AVRGYSFFGD SFVYVLFEDG TDPYWARSRV LEYLNQVQSR LPAQAKASLG PDATGVGWIY EYALIDRSGK MDISQLRALQ DWFLKYELKT VPDVAEVASV GGMVRQYQIV LDPDKLAAYG IPHTKVVEAI QRANQETGGS VLELGEAEYM VRASGYLGSL EDFRKVPLMT TAAGVSVRLG DVARVQIGPE MRRGIGELNG EGEAVGGVIV MRSGKNALQT IAAVKGKLQG LASSLPRGVE IVPVYDRSGL IERAVENLTH KLIEEFIVVA VVCFLFLFHL RSALVAIISL PLGILAAFIV MHYQGVNANI MSLGGIAIAI GAMVDAAVVM IENAHKHLEH WGHEHPGETL EGTARWHVIG ESAAEVGPAL FFSLLIITLS FVPVFTLEAQ EGRLFSPLAF TKTYAMAAAA GLSVTLIPVL MGYLVRGRIP DEKNNPLNRL LIAVYRPLLD RVLRAPKLTL VVALVVLATS LWPLRHIGGE FMPRLDEGDL LYMPSALPGL SAGKAAELLQ QTDRLIKTVP EVASVYGKAG RAESATDPAP LEMFETTIQF KPRDQWRAGM TTDKLVEELD RIVKVPGLSN IWVPPIRNRI DMLATGIKSP VGVKVAGTDL ATIDRLTGEI ERTLKDVPGV SSALAERLTG GRYVDVNIRR DDAARYGLNI ADVQSVVSSA VGGENIGETV EGLQRFPINL RYPREMRDSL EKLRVLPVLT GSGQRLVLSD VADIRVADGP PMLRSENARL SGWVYVDIRD RDLRSAVQDM QQAVEKQVKL PPGYSISWSG QFEFLERATA KLKVVVPFTL LIIFVLLYLT FGAFGEALLI MAALPFALVG GIWLLYLLGY NLSIAGAVGF IALAGVSAEF GVIMLLYLKN AWQERADQGK TSEADLLDAI REGAVLRVRP KAMTVAVILA GLLPIMWGTG TGSEVMQRIA APMVGGMVTA PLLSMFVIPA AYLLMRRSRE RKASPWMFWR RHRAAA
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