Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_0430 |
Symbol | |
ID | 5745967 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 461324 |
End bp | 462313 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641295493 |
Product | P-type conjugative transfer protein TrbG |
Protein accession | YP_001561461 |
Protein GI | 160895879 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
TIGRFAM ID | [TIGR02775] P-type conjugative transfer protein TrbG |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.127006 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCCGT CTTTCCGTAC TTACGTTTCC GTGCTGGCGC TCGCGGCCCT GGCGGGCTGC GCCACCCAGG GCAAGCCGCC GCCGACCATC TCGCTCGATG AGCCGGTGCA GGCGCAGCCG CTGCCGGAGC CGCCTGCACC TGTGGAGGCG GTCGCTGTGC CCGAGGTGCT GCCGATGCCG GCACAGTTGA AGCCAGCGCC CGAGGGCGAA GAAGCCAAGC CGGCGCCGGA GCCGGTCGAC GAGAAGGTGC GCGTCTCACG GGCCAATACC GAGGCGCGCG TCGCGCCCAC GCGCGAGGGC TACGTCAACG CGATTCAGGT GTGGCCTTTC ACGGACGGCG CGCTGTATCA GGTCTATGCG GCCGTGGGCC GCGTGACCGT GATCGCGCTC CAGCCCGGTG AGGAACTGGT GACGGTGGCC GCTGGCGACA CGGTGCGCTG GATCGTGGGC GACACATCGA GCGGCAGCGG GGATGCGCTG CGCGTGAACG TGATGGTCAA GCCCATCCGC TCGGGCCTCA AGACGAATCT CGTTGTAACC ACCAGCCGAC GCACCTATCT GCTGGAACTG ACCTCGACAG AGAAGACATG GATGGCGTCG ATATCCTGGG AGTACCCCAA GGACAAGATG CTCGCCTTGC AGCGCCAGGC GCAGGCGGCC AGCGCCGCCG CGCCGGTCGA GACCGGGCTG TCGCTGGAGA AGATCCGTTT CCGCTATGCC ATCAGTGGCA GCAATCCGCC GTGGAAGCCG CTGCGCGCCT TCGATGACGG CGAGAAGGTA TATATCCAGT TTCCCGCCGG CATCGCCCAG GGCGAGTTGC CGCCGCTGTT CGTGATCGGT GCGCAGGGCG ACGGGCAATT GGTGAACTAC CGCTTCCGCT CGCCGTATTT CATCGTTGAT CGCTTGTTCG GCGCTGCCGA GTTGCGCTTG GGCGGGGACA AGGGCGACGT GGTGCGGATC GAGCGCACCG ACGGCACGCG GGGGAACTGA
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Protein sequence | MNPSFRTYVS VLALAALAGC ATQGKPPPTI SLDEPVQAQP LPEPPAPVEA VAVPEVLPMP AQLKPAPEGE EAKPAPEPVD EKVRVSRANT EARVAPTREG YVNAIQVWPF TDGALYQVYA AVGRVTVIAL QPGEELVTVA AGDTVRWIVG DTSSGSGDAL RVNVMVKPIR SGLKTNLVVT TSRRTYLLEL TSTEKTWMAS ISWEYPKDKM LALQRQAQAA SAAAPVETGL SLEKIRFRYA ISGSNPPWKP LRAFDDGEKV YIQFPAGIAQ GELPPLFVIG AQGDGQLVNY RFRSPYFIVD RLFGAAELRL GGDKGDVVRI ERTDGTRGN
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