Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_0260 |
Symbol | |
ID | 5745796 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 293194 |
End bp | 294057 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641295322 |
Product | inner-membrane translocator |
Protein accession | YP_001561291 |
Protein GI | 160895709 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGTTT TTCTGCAGCA AGTGCTCAAC GGCCTGACCC TGGGCGGCAT CTACGGCCTG GTGGCCCTGG GCCTGACCCT GGTCTACGGC ATCCTGCACG TGCCCAATTT CGCGCACGGC GGCTTCTACA TGATCGGCGC CTTCGTGGCC TTCCAGGCCA TGGTGGCCTG GAGCTGGGGC TACTGGGCGG CCATGCTGAC CGCAGCCGTC GCGGTGGCGG TGCTGGGCAT CGTCAGCGAG CGGTTGATCT TCCATCCGCT GCGCAAGGCC TCGCCCCTGC ATCCCAAGAT CGCCTCCATC GGGCTGCTGC TGTTCCTGGA GGCGGGCGCT CAGGCGCTGT GGGGCGCGGA CTTCCAGCGC ATGCCCACGC CCTACACCTC CATCGTGGAG ATGGGCGGCA TCACGGCGCC CGCGCAGCGC CTGCTGATCA TCGGCGCGGC CTTTGCGCTG ATGGTGGCCC TGCACCTGTT CCTGACGCGC ACCATCACGG GCGCGACCAT CATCGCCATG GCGCAGAACC GAGAAGGCGC ATCCATGGTG GGCATCGACG CCAACCGCGT GTCCATGCTG ACCTTTGCCA TCTCGGGCGT GCTCGCGGCC GTGGCGGCCA CGCTGTATGC GCCCATCAAC CTGGTCTATC CGGCCATGGG CCACCTGGTC ATTACCAAGG CCTTCGTGAT CATCATCCTG GGCGGCATGG GCAGCATCCC GGGCGCCGTG CTGGGCGGGC TGATCATCGG CTTTGCCGAG AGCTTCGGCG CCTACTACAT CTCCACCGAC TACAAGGACA TCATCGCCTT CGTGCTGCTG GTGGTGATCC TGTCGCTGCG CCCGCAGGGC CTGTTCGCCA AGAGGAGTCA TTGA
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Protein sequence | MDVFLQQVLN GLTLGGIYGL VALGLTLVYG ILHVPNFAHG GFYMIGAFVA FQAMVAWSWG YWAAMLTAAV AVAVLGIVSE RLIFHPLRKA SPLHPKIASI GLLLFLEAGA QALWGADFQR MPTPYTSIVE MGGITAPAQR LLIIGAAFAL MVALHLFLTR TITGATIIAM AQNREGASMV GIDANRVSML TFAISGVLAA VAATLYAPIN LVYPAMGHLV ITKAFVIIIL GGMGSIPGAV LGGLIIGFAE SFGAYYISTD YKDIIAFVLL VVILSLRPQG LFAKRSH
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