| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0254 |
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| Symbol | |
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| ID | 5745790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 285656 |
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| End bp | 286972 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641295316 |
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| Product | mandelate racemase/muconate lactonizing protein |
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| Protein accession | YP_001561285 |
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| Protein GI | 160895703 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.346472 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCA CCCACGCGAT CCACGCGATC CGCCACATAC GCATCACGCC CATTGCCTTC
CGCGATCCGC CGCTGCTCAA TGCGGCCGGC ATCCACGAGC CCTGGGCGCT GCGTTCCATC
ATCGAGATCG AGACGGCCTC GGGCCTGGTC GGCATCAACG AAAGCTATGG CGACCAGCCC
ATGCTCGATG CGCTGGCCAA GGCCGCGCCC GCGCTGGTGG GGCTGTCGCC CTGGGCGCTC
AACGAGATGG AGGTCCGCGT CGCGGCCCTG GTGGCGCCGC CTGCGCTGAC GGCCTCCGAA
TTCCTGGGCC AGCAGGTGTC GCTGGCGCCG GGCACGCATG TGTCCAAGAC CGTGGCCAAG
GTGGTCAGCG CCTTCGAGGT CGCCATGCTG GACCTGCAGG GCCAGATGGC GGGTGCCCCC
ATCGTGGACC TGCTGGGCGG CGCGGCGCGC GACAGCGTGC CGTTCTCGGC CTACCTGTTC
TACAAGTACG CCGAGCACAT CGACAGGCCC TATGGACCAG ATTCTTCGCC CGACGCCTGG
GGCGAGGCCC TGGCGCCGCA GCAGCTGGTG GAGCAGGCGC GGCGCATGAT TGCGCAGTAC
GGCTTCCAGA GCATCAAGCT CAAGGCCGGC GCGCTGCCGC CCGAGCAGGA GGCGGCCGGC
ATCCTGGCGC TGGCCGATGC CTTTCCGGGC ACGCCGCTGC GCATCGATCC CAATGGCAAC
TGGACGGTGG AGACCAGCCT GAAGATCGTG CAGCAGCTGC AGGGCGTGCT CGAGTACTAC
GAGGACCCGG CGCCGGGCCT GGACGGCATG GCCGCCGTGG CACGCGAGTG CGATGTGCCG
CTGGCCACCA ACATGGTGGT GACGGACTTT GCCGAGTTCC GCCGCAACGC CGACATGGGC
TGCCCCGTGA AGATCGTGCT CAGCGACCAC CACTACTGGG GCGGGCTGCG CGCCACCCAG
CGCCTGTCCA CGCTGTGCCG CACCTTCGAC CTGGGCCTGT CCATGCACAG CAACTCGCAC
CTGGGCGTGA GCCTGGTGGC CATGACGCAC CTGTGCGCCA GCGTGCCCCT GCTGACCTAT
GCCTGCGACA CGCACTACCC CTGGCAGGAC GAGGAAGTCG TCGAGGGCGG CCGGCTGCAG
TTCGAGCAGG GCAGCCTGCG CGTGCCCACG GCGCCCGGCC TGGGTGTGCG GCTGGACCGC
GAGGCCCTGG CCCGCCTGCA CGACAACTAC CTGCACTGCG GCATCCGCAA CCGCGACGAC
CTGGGGCAGA TGCGCAAGTA CGACCCCGCG TTCACCGGCC ACCAGCCGCG CTTCTGA
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| Protein sequence | MSTTHAIHAI RHIRITPIAF RDPPLLNAAG IHEPWALRSI IEIETASGLV GINESYGDQP
MLDALAKAAP ALVGLSPWAL NEMEVRVAAL VAPPALTASE FLGQQVSLAP GTHVSKTVAK
VVSAFEVAML DLQGQMAGAP IVDLLGGAAR DSVPFSAYLF YKYAEHIDRP YGPDSSPDAW
GEALAPQQLV EQARRMIAQY GFQSIKLKAG ALPPEQEAAG ILALADAFPG TPLRIDPNGN
WTVETSLKIV QQLQGVLEYY EDPAPGLDGM AAVARECDVP LATNMVVTDF AEFRRNADMG
CPVKIVLSDH HYWGGLRATQ RLSTLCRTFD LGLSMHSNSH LGVSLVAMTH LCASVPLLTY
ACDTHYPWQD EEVVEGGRLQ FEQGSLRVPT APGLGVRLDR EALARLHDNY LHCGIRNRDD
LGQMRKYDPA FTGHQPRF
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