Gene Daci_0252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0252 
Symbol 
ID5745788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp283659 
End bp284636 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content70% 
IMG OID641295314 
Producthypothetical protein 
Protein accessionYP_001561283 
Protein GI160895701 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTGA GCCGAAAGCA GTTCCTGCGC GCCGCTGGCG CCACCGCCCT CGTGGCCTCC 
GGCGCCGGTG CGCTGGCCCA GAGCAACTGG CCCACGCGCC CGCTGCGCCT GGTGGTGCCC
TACCCGCCGG GCGGCAGCTC GGACATCATT GCGCGCGCCA TCGGCCCGCT GCTGTCGGCA
GAACTCAAGC AGCCCGTGGT CATCGAGAAC AAGCCCGGCG CCAACGGCAA CCTGGGCGCC
GACATGGTGG CCAAGGCCCA GCCCGACGGC CACACGCTGA TGCTGTGCGA CCTGGGTGCG
CTGGCCATCT CGCCCTCGCT CTACACCAAG CTGTCCTTCG ACCTGTCCCG GGACCTGCGC
GGCACGGCCA TGCTGGCCTA CTCGCCCCAC CTGCTGGTGG TCCATCCTTC GGTGCCGGCC
AACAACCTGC AGGAGCTGGT GGCCCTGTCC AAGAAGGAAG ACCTGAGCTT TGCCGTCACC
GCCACGGGCA GCGCCCCGCA CCTGGCCGGC GTGGAACTGG CGCGCGCCAC GGGCGCCCGC
TGGGAATACG TGCCCTACAA GGGCGGCGTG CAGTCCATCC AGGACACGGT GGCAGGCCAG
ACCCAGGTGC TGATGAACGG CATGCTGGCC ACCTACCCCC ATGTGCAAAG CGGCAAGCTC
AAGCTGCTGG GCCTGTCCAA GGGCACGCGC ATGCCGCTGG CCGCCAACGT GCCCACCATC
GCCGAGCAGG GCGTGCCCGG CTTCGAGACC GGCACCTGGC AAGGCGTGGT CGTTCCGGCC
AAGACGCCCG AGGCCGTGGT CCAGCGCCTG CATGAGGCCC TGATCACCGC CATCCGATCG
CCCGAGGTGC GCGCCCGCCT CACGGGCCAG GGCGCCGAGG TCGTGACCAT GAACCCCGCC
GAGACCGCGC GCTTCCTGAC CACCGAGCGC CAGCGCTGGC AAAAAGTGGT TCAAACAGCC
GGTTTGAAGC TCGACTGA
 
Protein sequence
MTLSRKQFLR AAGATALVAS GAGALAQSNW PTRPLRLVVP YPPGGSSDII ARAIGPLLSA 
ELKQPVVIEN KPGANGNLGA DMVAKAQPDG HTLMLCDLGA LAISPSLYTK LSFDLSRDLR
GTAMLAYSPH LLVVHPSVPA NNLQELVALS KKEDLSFAVT ATGSAPHLAG VELARATGAR
WEYVPYKGGV QSIQDTVAGQ TQVLMNGMLA TYPHVQSGKL KLLGLSKGTR MPLAANVPTI
AEQGVPGFET GTWQGVVVPA KTPEAVVQRL HEALITAIRS PEVRARLTGQ GAEVVTMNPA
ETARFLTTER QRWQKVVQTA GLKLD