Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_0248 |
Symbol | |
ID | 5745784 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 279209 |
End bp | 280546 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641295310 |
Product | glucarate dehydratase |
Protein accession | YP_001561279 |
Protein GI | 160895697 |
COG category | [M] Cell wall/membrane/envelope biogenesis [R] General function prediction only |
COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
TIGRFAM ID | [TIGR03247] glucarate dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCTCCA CCCCGACCAT CACCGAGATC GAAGTCATTC CCGTCGCCGG CCGCGACGGC ATGCTCATGA ACCTCAGCGG CGCGCATGCG CCCTACTTCA CGCGCAACAT CGTGCTCATC CACGACAGCG CGGGCCACAC CGGTGTGGGC GAGGTGCCTG GCGGCGAAGG CATACGCCAG GCGCTGGAGG ACAGCAAGGC GCTGCTCATC GGCCAGTCCG TGGGCAACCA CCTCAAGCTG CTGCAGAACC TGCAGCAGGC CCTGGCCGGG CGCGACACGG GTGGGCGCGG CCTGCAGACC TTCGATCTGC GCATTGCCGT GCATGCCGTC ACCGCCGTGG AGTCGGCCCT GCTGGACCTG CTGGGCCAGC ACCTGGGCGT GCCCGTGGCA GCCCTGCTGG GCGAAGGCCA GCAGCGCGAC CGCGTGGAGA TGCTGGGCTA CCTGTTCTTC ACCGGCCCCA CCGACAAGAC CGACCTGCCC TACGTCCAGC CCGGCGAAGA CCAAAGCGGC ACCGACGACT GGACGCAGGT GCGCCACATG ACCGCCATGG ACCCGGCCGC CATCGTGCGC CAGGCCGAGG CGGCGCACGC GCGCTACGGC TTCAACGACT TCAAGCTCAA GGGCGGCGTG CTGGCCGGCG AGCAGGAGGT GGAGGCCGTC ACCGCGCTGG CCAGGCGCTT CCCGCAGGCG CGCGTCACGC TGGACCCCAA CGGTGGCTGG CTGCTCAAGG ACGCCATCCG CCTCATGCGC GACATGCACG GCGTGCTCGC CTATGCCGAA GATCCCTGCG GCGCCGAGAA CGGCTTCTCG GGCCGCGAAG TCATGGCCGA ATTCCGCCGC GCCACCGGCC TGCCCACGGC CACCAACATG ATCGCCACCG ACTGGCGCCA GATGGTGCAT GCGCTGTCGC TGCAGTCCGT GGACATCCCC CTTGCCGACC CGCATTTCTG GACCATGGCC GGCTCCGTGC GCGTGGGCCA GACCTGCCGC GACTGGGGCC TGACCTGGGG CTCGCACTCC AACAACCACT TCGACATCTC GCTGGCCATG TTCACCCACG TGGCCGCCGC CGTGCCCGGC AAGGTCACGG CCATCGACAC GCACTGGATC TGGCAGGACG GCCAGTACCT CACCCAGAAC CCGCTGCAGA TCAAGGGCGG CTTCGTCGAG GTGCCCAAGA CCCCGGGCCT GGGCGTCACC GTGGACCGCG CCGCGCTGCA GCGCGCCAAC GCCCTGTACC TGGAGCACGG CCTGGGCGCG CGCAATGACG CCATGGCCAT GCAGTACCTG ATTCCCGGCT GGACCTTCGA CAACAAGCGC CCCTGCATGG TCCGCTGA
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Protein sequence | MSSTPTITEI EVIPVAGRDG MLMNLSGAHA PYFTRNIVLI HDSAGHTGVG EVPGGEGIRQ ALEDSKALLI GQSVGNHLKL LQNLQQALAG RDTGGRGLQT FDLRIAVHAV TAVESALLDL LGQHLGVPVA ALLGEGQQRD RVEMLGYLFF TGPTDKTDLP YVQPGEDQSG TDDWTQVRHM TAMDPAAIVR QAEAAHARYG FNDFKLKGGV LAGEQEVEAV TALARRFPQA RVTLDPNGGW LLKDAIRLMR DMHGVLAYAE DPCGAENGFS GREVMAEFRR ATGLPTATNM IATDWRQMVH ALSLQSVDIP LADPHFWTMA GSVRVGQTCR DWGLTWGSHS NNHFDISLAM FTHVAAAVPG KVTAIDTHWI WQDGQYLTQN PLQIKGGFVE VPKTPGLGVT VDRAALQRAN ALYLEHGLGA RNDAMAMQYL IPGWTFDNKR PCMVR
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