Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_0238 |
Symbol | |
ID | 5745774 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 269452 |
End bp | 270765 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641295300 |
Product | major facilitator transporter |
Protein accession | YP_001561269 |
Protein GI | 160895687 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCCTG CTTTGACCAA GCAAACCGTC TCGACCCGCA ACATCGTGGC TGCCGTCATC GGCAACGCGC TGGAGTGGTA TGACTTCCTG GTGTTCGCCT TCATGACACC CATCGTCGCC AAGCTGTTCT TTCCCAGCAA TCCCGACAAT CCGGACGACA ACATCAACCG CATCCTGATG ACCACGGCCG TGTTCGGCGT GGGCTTCTTC ATGCGGCCCG TGGGCGGCAT CCTGCTGGGC CTGTACGGGG ACCGCAAGGG CCGCAAGGCG GCCATGGTGA TGGTGACGGG CCTGATGGCG GTGGCGATCG CGCTGATCAC GCTGGCGCCC ACCTATGCAG CGGTGGGCAT CCTGGCGCCG CTGTTCATCG TGCTGGCACG GCTGCTGCAG GGCTTTGCGG CCGGCGGCGA GTTCGGCACG TCCACGGCAC TGCTGATCGA GCTGGCACCG CCCGGCAAGC GCGGCTTCTA TGGCTCCTGG CAGATGGCCG GCCAGATGCT GGCCCTGCTG ATCGGCGCGG CCACGGGCAC GCTGATCACC GAGATCTTCA CCGAGGAGGA GCTGATGGCC TGGGCCTGGC GCGTGCCCTT CGCCGTGGGC CTGCTGATCG TTCCCGTGGC GCTGTACATC CGCCGCCATG TGGAGGAGCC CGAGGTCTTC AAGGAAATGC AGGCCGCTCA GGCCAGCGGC AAGGCGCGCC AGATCGGCAT CATGGAGATG CTGCGCACGC ATGCGCGCGA GACGCTGGTG GGCATGGGCC TGGTGGTCAC GGCCACGGTG TCCATCTACA TCACCTTCAC CTATCTGGTG ACCTATGCCA CGGTGACGCT GAAGCTGCCC ATGCGCGATG CCTTCATGGT GCAGATGGCC GGCGCCGCGC TGATGGTGGT GATCATGCCG TTCTTCGGCG CCCTGTCGGA CCGCGTGGGC CGCCGCATGC TGACCATCGG CTCGCTGATC GGCTACCTGG TGGTGCTCTA CCCGCTGTAT GCCTGGCTGA CGGACGGCCC CACGGTGCAG AAGCTGCTGA TCACCCAGCT GGTGGTCTGC GTGTTCGTGG CCGTGTTCTT CGGCGTGTTC AGCACGGTGA TGGCCGAGCT GTTCCCGCCC CAGGTGCGTT CGGCCGGCAT GTCCATGGCC TACAACGTGG CGGTGATGAT CTTCGGCGGC TTCGCGCAGT TCATCGTGAC CTGGCTGATC CGCTCCACGG GCTCGCCCAT GGCGCCGGCC TTCTATGTGA TGTTCGGCGT GACGCTGGGC CTGTTCGCGG CCTTCTTCAT CAAGGACCGC GCGATGGAGC GCAACCTGCG CTGA
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Protein sequence | MDPALTKQTV STRNIVAAVI GNALEWYDFL VFAFMTPIVA KLFFPSNPDN PDDNINRILM TTAVFGVGFF MRPVGGILLG LYGDRKGRKA AMVMVTGLMA VAIALITLAP TYAAVGILAP LFIVLARLLQ GFAAGGEFGT STALLIELAP PGKRGFYGSW QMAGQMLALL IGAATGTLIT EIFTEEELMA WAWRVPFAVG LLIVPVALYI RRHVEEPEVF KEMQAAQASG KARQIGIMEM LRTHARETLV GMGLVVTATV SIYITFTYLV TYATVTLKLP MRDAFMVQMA GAALMVVIMP FFGALSDRVG RRMLTIGSLI GYLVVLYPLY AWLTDGPTVQ KLLITQLVVC VFVAVFFGVF STVMAELFPP QVRSAGMSMA YNVAVMIFGG FAQFIVTWLI RSTGSPMAPA FYVMFGVTLG LFAAFFIKDR AMERNLR
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