| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0220 |
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| Symbol | |
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| ID | 5745756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 250498 |
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| End bp | 251763 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641295282 |
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| Product | urea ABC transporter, urea binding protein |
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| Protein accession | YP_001561251 |
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| Protein GI | 160895669 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | [TIGR03407] urea ABC transporter, urea binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.618006 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCACC CCTCCGACCC CCGCACACCT GGTTCCCCCG GCACGGAAAT GGGCCGCCGC
CGCGTCCTGC AGGCGCTTGG CGCCGCCTCG GTGGCCGGGC TGCCGGCCTG GTCCTTCGCC
CAGCCCACGG CCCAGGTCAA CACCACCAAG CTGGCCGTGA CCGACACCGA AGTCGTCGTG
GGCCAGCTGC ACTCGGCCAC GGGCACCATG GCGATCTCCG AGACCGGCTC CATCCAGGCC
GAGCAACTGG CCATCGACCA GATCAACGCC ATGGGCGGCA TCCTGGGCCG CAAGATCCGC
GTGATCAAGG AAGACGGCGC CTCCGACTGG CCCACCTTCG CCGAGAAGTC CAAGAAACTG
CTCATCAACG ACCGCTGCGC CGCCGTCTTC GGCTGCTGGA CCAGCGCCTC GCGCAAGGCC
GTGCTGCCCG TGTTCGAGAA GGAAAACGGC CTGCTGTACT ACCCCACCTT CTACGAAGGC
CTGGAGCAGT CCAAGAACGT GATCTACACG GGCCAGGAAG CCACGCAGCA GATCCTGTAC
AGCCTGGACT GGGCCAAGGC CGAGAAGAAG GCCAAGACCT TCTTCCTGAT CGGCTCGGAC
TACATCTGGC CGCGCACCTC CATGAAGATC GCGCGCAAGC ACATCGAGAA CTTCCAGAAG
GGCAAGGTCG TCGGCGAGGA GTACTACCCG CTGGGCAGCA CCAACTTCGG CTCGCTGGTC
AACAAGATCA AGCTGCAAAA GCCGGACTGC ATCTTCGTGG CCGTGGTGGG CGGCTCCAAC
GTGGCCTTCT ACAAGGCGCT CAAAGCCGCG GGCATCACGG GTGACAAGCA ATTGCTGGTC
ACGCTGTCGG TGACCGAGGA CGAGATGACC GGCGTGGGCG GCGAGAACTT CACGGGTTTC
TACTCCTCGA TGAAGTACTT CCAGACGCTG GACAACGAGA ACAACAAGAA GTTCGTGGCC
GCCTTCAAGG CCAAGTACGG CCCCAATGCC GTCATCGGCG ACGTCACCCA GGCCGGCTAC
CTGGGCCCCT GGCTGTGGAA GGCCGCCGTG GAAAAGGCCA AGAGCTTCGA CGTGGACAAG
GTGGTGGCCG CATCGCCGGG GCTGGAGCTC AAGACCGCGC CCGAAGGCTA CGTGAAGGTG
GACGCCAACC ACCACCTGTG GAGCAAGTCG CGCATTGCCG TGGGGCAGCC GGACGGCACG
TTCAAGGTGG TCTCGGAATC TCCGGAATTG ATCAAACCCG ATCCCTTCCC CAAGGGTTAC
CAGTAA
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| Protein sequence | MSHPSDPRTP GSPGTEMGRR RVLQALGAAS VAGLPAWSFA QPTAQVNTTK LAVTDTEVVV
GQLHSATGTM AISETGSIQA EQLAIDQINA MGGILGRKIR VIKEDGASDW PTFAEKSKKL
LINDRCAAVF GCWTSASRKA VLPVFEKENG LLYYPTFYEG LEQSKNVIYT GQEATQQILY
SLDWAKAEKK AKTFFLIGSD YIWPRTSMKI ARKHIENFQK GKVVGEEYYP LGSTNFGSLV
NKIKLQKPDC IFVAVVGGSN VAFYKALKAA GITGDKQLLV TLSVTEDEMT GVGGENFTGF
YSSMKYFQTL DNENNKKFVA AFKAKYGPNA VIGDVTQAGY LGPWLWKAAV EKAKSFDVDK
VVAASPGLEL KTAPEGYVKV DANHHLWSKS RIAVGQPDGT FKVVSESPEL IKPDPFPKGY
Q
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