Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_0173 |
Symbol | |
ID | 5745709 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 197543 |
End bp | 198844 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641295235 |
Product | L-carnitine dehydratase/bile acid-inducible protein F |
Protein accession | YP_001561204 |
Protein GI | 160895622 |
COG category | [C] Energy production and conversion |
COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCACA CAGAAACCCC CTCCCCCAGC CCCATCCACA ACACGGCCAC CCAGACCGCA GGAGCGCTGG GCCATCTGCG CGTGCTCGAC CTCTCGCGCG TGCTGGCCGG CCCCTGGTGC ACCCAGAACC TGGCCGACAT GGGGGCCGAC GTGATCAAGA TCGAAAAGCC CGGCGAGGGC GACGACACGC GCCACTGGGG CCCGCCCTTC TTCCCCGATG CGCAAGGCAA TCCCTCGGAC AACGCCGTGT ACTTCGCGGC CTGCAACCGT AACAAGCGAT CGATCACCGT GGACATGTCC ACGGCCGAGG GCCAGCAGCT GATCCGCGAG CTGGCCATGC AAAGCGATGT GGTGGTGGAG AACTTCAAGA CCGGAGGCCT CAAGCGCTAC GGCCTGGACT ACGCCTCGCT GAGCGCGCTG AACCCGCGCC TGATCTACTG CTCGGTCACG GGCTTCGGAC AGACCGGGCC CTATGCGCCG CGCGCCGGCT ACGACCTGCT GGTGCAGGCC ATGAGCGGCC TCATGAGCAT CACGGGCCGC GCCGACAGCG AGCCCGGCGG CGGCCCGCTG CGCGTGGGCG TGGCCGTGAT CGACCTGTTC ACCGGCATGT ATGCGACCAC GGCCATCCTG GGCGCCGTGG AGGCGCGCCA CCACACGGGG CGGGGCCAGC ACATCGACAT GGCCTTGCTG GACGTAGCCA TGGCCGTGCT GGCCAACCAG GGCGCGGGCT TCCTGAACAC CGGCCATGTG CCGGGCCGCC AGGGCAACAC CCACCCCAGC GTCGTGCCCT ACCAGGACTT CCCCACGGCC GACGGCCGCA TGCTGCTGGC CATCGGCAAC GACGGCCAGT TCGCGCGCTT TTGCGGGGCG GCCGGCGTGG ACTGGGCGCG CGACGAGCGC TTTGCCACCA ATGCCGGCCG CGTCATCCAC CGCGACGCGC TGATCCCGCT GATGTCCGAT CTCACGCGCG GCCGGCCCAC GGCCGAGTGG ATCGCGCTGC TGGAGGACAA GGCCGTGCCC TGCGGCCCCA TCAACCACAT CGGCCAGGCC TTCGACGATG CCCAGGTGCG CGCGCGCGGC CTGCGCGTGG AGCAGGAGCG CTATCCGGGC GCCACGCCGC CTGCGGGCGA GACCATCAAC CGCGTGGTGA CCACGGCCAG CCCGCTGCGC CTGTCGGACA CGCCCACCAC GCTGCGCCAT GCGCCGCCGG CCCTGGGCCA GCACACGGAC GAGGTGCTGC GCGAGCGCCT GGGCCTGGAT GCGCAGCAGC TGCAGGCCCT GCGCGTCAAG GGCGTGGTCT GA
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Protein sequence | MNHTETPSPS PIHNTATQTA GALGHLRVLD LSRVLAGPWC TQNLADMGAD VIKIEKPGEG DDTRHWGPPF FPDAQGNPSD NAVYFAACNR NKRSITVDMS TAEGQQLIRE LAMQSDVVVE NFKTGGLKRY GLDYASLSAL NPRLIYCSVT GFGQTGPYAP RAGYDLLVQA MSGLMSITGR ADSEPGGGPL RVGVAVIDLF TGMYATTAIL GAVEARHHTG RGQHIDMALL DVAMAVLANQ GAGFLNTGHV PGRQGNTHPS VVPYQDFPTA DGRMLLAIGN DGQFARFCGA AGVDWARDER FATNAGRVIH RDALIPLMSD LTRGRPTAEW IALLEDKAVP CGPINHIGQA FDDAQVRARG LRVEQERYPG ATPPAGETIN RVVTTASPLR LSDTPTTLRH APPALGQHTD EVLRERLGLD AQQLQALRVK GVV
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