Gene Daci_0147 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0147 
Symbol 
ID5745683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp160788 
End bp161567 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content65% 
IMG OID641295209 
ProductABC transporter related 
Protein accessionYP_001561178 
Protein GI160895596 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.288686 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTGC TGTCCATTCA AGGTGTTTCG CGCACCTTCA CCAGCCACAA GGGCACGAGC 
ACGCAGGCCC TGCTGCCTGT GGATTTCGAG GTCCGCGAGA ACGACTTCGT CACCATCCTC
GGCCCTTCGG GCTGCGGCAA GTCCACCATG CTGCGCATTG CGGCGGGGCT GGATTTCCCG
ACCACGGGCC AGGTGCTGCT GGACGGCCGC GCCGTGGACG GGCCGGGCGC CGACCGAGGC
ATGGTGTTCC AGAGCTACAC GCTGTTCCCC TGGCTGACGG TGGCCCAGAA CATCCGCTTC
GGCCTGCGCG AGAAGGGTGT GAGCGAGGCG CTGCAAAAGG AGCGCAGCGA CTACTTCATC
GCCAAGGTGG GGCTGCGCGG CTTCGAGAAC CACTTTCCCA AGCAGCTGTC GGGCGGCATG
CAGCAGCGCA CGGCCATTGC GCGCGCGCTG GCCAACGATC CCAAGATCCT GCTCATGGAC
GAGCCCTTCG GCGCACTCGA CAACCAGACC CGCGTGCTCA TGCAGGAGCT GCTGCTGGGC
ATCTGGGAGG CCGAGCGCAA GACCGTGATG TTCGTCACCC ACGACATCGA CGAGGCCATC
TTCATGGCCA ACCGCGTGGC CGTGTTCAGC GCGCGCCCGG GCCGCATCAA GGCCGATATC
CCCGTGAACC TGCCGCATCC GCGCCACTAC ACGGTCAAGA CATCGCCCGA GTTCATGGAG
CTGAAAGCCC GGCTGACCGA AGAGATTCGC GCAGAGTCGC TGGCCGCTGC TGCACACTGA
 
Protein sequence
MNLLSIQGVS RTFTSHKGTS TQALLPVDFE VRENDFVTIL GPSGCGKSTM LRIAAGLDFP 
TTGQVLLDGR AVDGPGADRG MVFQSYTLFP WLTVAQNIRF GLREKGVSEA LQKERSDYFI
AKVGLRGFEN HFPKQLSGGM QQRTAIARAL ANDPKILLMD EPFGALDNQT RVLMQELLLG
IWEAERKTVM FVTHDIDEAI FMANRVAVFS ARPGRIKADI PVNLPHPRHY TVKTSPEFME
LKARLTEEIR AESLAAAAH