| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0138 |
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| Symbol | |
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| ID | 5745674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 149086 |
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| End bp | 151518 |
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| Gene Length | 2433 bp |
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| Protein Length | 810 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641295200 |
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| Product | TonB-dependent hemoglobin/transferrin/lactoferrin family receptor |
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| Protein accession | YP_001561169 |
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| Protein GI | 160895587 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01785] TonB-dependent heme/hemoglobin receptor family protein
[TIGR01786] TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0694219 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.222818 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGTGT CTTCGCGTTC GTCTTTCCTC TCCCTCTCCC GCAATCCCTC GCGCACGCCG
GTATTGCGGC CCAGCCTGCT GGCCGTGGCC GTGCAGGCCG CCGTGATCGG TCTGGCCTCG
CCCGGCGCCT GGGCACAGAC GCAGACGCAG ACGCAAACGC ATGTGCAGAC TGCGGACGAT
GAGGCCCGGC TGATGGCACA GGCTCCCACC AAGGCGCTGG CCCAGGTCGA TGTGGTCGAT
GCAGCCGAGC CCGTGCAGCG CACGCCGGGC GCCTCCACCA CCGTCAGCGG CCCGGCGCTG
GAGCAGGCCG GCAGCATGGC CGACGTGGTG CGCTACCAGC CCCTGGTCTC CGCGCCGGGC
ACGGCCTCGG GCACCAGCCG CAACCGCAGC AGCTTCGACC GTTCGGGCAC CACGGGCTAC
AACATCCGCG GCATCGAGGG CAACCGCATC GGCATGGATG TGGACGGCGT CGAGATGCCC
GACGCCACCA CGCGCCCCTA TGTGAGCCGT GTCGGCGCCA ACACCTTCGG CGTGGGCCGT
GACTTCATCG ACCCCGAGAT GTTCTCGGCC GTGGACATCC TCTCCGGCAC CACCACGGCG
CGGCGCGCGG CCGGTGGCAT CGGCGGCTCG GTGGGCTTTC GCACCAAGTC CGCCGAGGAC
TACCTGGTGG GCGGCAAGAC CTCCTACCTG GGCGGCAAGA TCGGCCACGA CACGGCCGAC
CGCTCCTGGA ACGAGAGCTT CACGGCCGCT GGCCGCTCGG GCGACCTCGA CGGCCTGATC
GCCTATTCGC GCCGCGACGG CCACGAGACG CGCAACCACA GCGCCATCGT CAACAGCTAT
CCCGATGACT GGAACTCCAA CGCGCTGCTG CTCAAGGGCG GCCTGCGCAT CAACCCGGCC
CACCGCCTGG TGCTGTCGGC CGACCTGTAC CGCCGCAAGA ACGACACCTC CTTCCACGGC
TGGGACACCA CCAACACCAG CATCACCGAA AGCTCGCGCC AGAACAGCGA CACCAGTCGC
AACACGCTGC AGCTGCAGCA CCTGTGGACA CCGGCCGGCG CCTGGGTGGA CCAGCTGGAC
ACGCGGCTGT ACTTCCAGAA CACGGACACC AACGACGTCA CCGACACCAC CACGCTGGCC
ACGGGCGCCA AGGTGCACAA CGTCTCGGGC AACGAGACGC GCACCTGGGG TTTCTCGAGC
ACGGGCGACA AGCGCATCGA CCGCCACCGC CTGAGCTTTG GCGTGAATGC ATCGACACAG
GACACGGAGC GTCCGTGGAA CGTTTTCGCT ACCGGCACGC CCGTTATGAA GCCCCAGCCC
GACACCACCA CCCGCCGCTA CGGCGCCTTC CTGCAGGACG AGATCAGCTT CCAGGCCGGC
GGCCGCCGCC TGGCGCTGAT TCCCGCGCTG CGCGTGGACC GCGTGGAGAT CAAGACACGC
GACCTGGACA ACTTCGTCTC GGGCGTGCTC ACGGCCGCCG ATGTGGAAAA GATTTACGGA
GGCACGCGCG GCAACACCAT CCTCAGCCCC AGCCTGGCCC TGGTCTATGA CCTCACGCCC
ACGTTCAGCG CCTATGCCCA GTTCAAGCGC AGCGGGCGAG TGCCCTCGGC CGGCGAGATC
TTCGGCTCGT GGAACATGGC CAGCAACTAC AACGCGGCAG GCCAGTACGC CCTGGTGGGC
AACCCCAACC TGAAGGAGGA AAGCAGCAAT GCCTTCGACT TCGGCCTCAA GGGTTCGCCC
ACGCCGGGCG TGACCTTCAA CAGCTCGGTC TTCTATACCA GGTACTCCGA CTTCATCGCC
TACACGCGCT ACCTGCGCGC GGGCCGTCCC GACCTGTTCG TCAACGTGCC CGCCCACATC
GGCACCATCT ACCAGGCCGA GAACCGCGAC AGCGCAAAGA TCTACGGCTT CGAGGCCAGC
GCGCGCCTGG ACCACGGCCA GTGGATGCCC GCCGCCAGGG GCCTGTACTC CACCTGGGCG
CTGGGCATCA GCCGCGGCAC CTCCAAGTCC TACTACGCAG GCGACAAGGA TGTGCCGCTG
GACAGCGTGC TGCCGCGCAA GGCCATCGTC GGCGTGGGCT ATGACGCACC GGCCCGGCAA
TGGGGCCTGA ACCTGACCGG CACCTTCGTC GCGGGCAAGC AGGCCGTGGC CACCAACCGC
GACAGCTACC TGAACGCGGG CACCGGCCTG ACCGACTCGA CCACCGAGCT GTTCCGCGTG
CCCGGCTATG CCATCTTCGA CCTGGCCGGC TACTGGCAGG TCGCAAAGAA CGTGCGCCTG
AACGCCGGCA TCTACAACCT GGGCGACAAG CGCTACTGGG ACTATTCCAG CACCCGCAGC
CTGCAGCCCG GCGTGGCGCG CGACCGCCGC GACATCGAGC TGCTGAGCAA CCCGGGCCGC
ACCTTCGCCG TGTCCATGAA CGTTGCGTTC TGA
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| Protein sequence | MAVSSRSSFL SLSRNPSRTP VLRPSLLAVA VQAAVIGLAS PGAWAQTQTQ TQTHVQTADD
EARLMAQAPT KALAQVDVVD AAEPVQRTPG ASTTVSGPAL EQAGSMADVV RYQPLVSAPG
TASGTSRNRS SFDRSGTTGY NIRGIEGNRI GMDVDGVEMP DATTRPYVSR VGANTFGVGR
DFIDPEMFSA VDILSGTTTA RRAAGGIGGS VGFRTKSAED YLVGGKTSYL GGKIGHDTAD
RSWNESFTAA GRSGDLDGLI AYSRRDGHET RNHSAIVNSY PDDWNSNALL LKGGLRINPA
HRLVLSADLY RRKNDTSFHG WDTTNTSITE SSRQNSDTSR NTLQLQHLWT PAGAWVDQLD
TRLYFQNTDT NDVTDTTTLA TGAKVHNVSG NETRTWGFSS TGDKRIDRHR LSFGVNASTQ
DTERPWNVFA TGTPVMKPQP DTTTRRYGAF LQDEISFQAG GRRLALIPAL RVDRVEIKTR
DLDNFVSGVL TAADVEKIYG GTRGNTILSP SLALVYDLTP TFSAYAQFKR SGRVPSAGEI
FGSWNMASNY NAAGQYALVG NPNLKEESSN AFDFGLKGSP TPGVTFNSSV FYTRYSDFIA
YTRYLRAGRP DLFVNVPAHI GTIYQAENRD SAKIYGFEAS ARLDHGQWMP AARGLYSTWA
LGISRGTSKS YYAGDKDVPL DSVLPRKAIV GVGYDAPARQ WGLNLTGTFV AGKQAVATNR
DSYLNAGTGL TDSTTELFRV PGYAIFDLAG YWQVAKNVRL NAGIYNLGDK RYWDYSSTRS
LQPGVARDRR DIELLSNPGR TFAVSMNVAF
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