Gene Daci_0086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0086 
Symbol 
ID5745622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp93888 
End bp95195 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content66% 
IMG OID641295149 
Producturacil-xanthine permease 
Protein accessionYP_001561118 
Protein GI160895536 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2233] Xanthine/uracil permeases 
TIGRFAM ID[TIGR00801] uracil-xanthine permease 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.587016 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCCTTT TCCAATGGAC GGAAAAATCC GCCAACCAGC TGCAACGGGG AGGCGTGATC 
GGCCCCGATG AGCGCCTGCC CTGGCCCCAG ACCGGGCTGA TGGGCATACA GCACGTGATC
GCCATGTTCG GCTCCACCGT GCTGGCGCCC ATCCTCATGG GGTTCGATCC CAACGTGGCC
GTGCTCATGA GCGGCATCGG CACGCTGATC TTCTTCCTGA TCACGGGCGG CAAGGTGCCC
AGCTACCTGG GTTCGTCCTT TGCCTTCATC GGCGTGGTGA TCGCAGCCAC GGCCTATGGC
GGCAAGGGCG CCAACGGCAA CATCGGCGTG GCGCTGGGCG GCATCATTGC CTGCGGTGCG
GTCTATGCGC TGATCGGTCT GGTGGTGCAG ATGGTGGGCA CGCGCTGGAT CGAGCGCTTC
ATGCCGCCCG TGGTCACGGG CGCCGTGGTG GCCGTGATCG GGCTGAACCT GGCGGCCATC
CCCGTCAAGA ACATGGCGGC CAACAACTTC GAGTCGTGGA TGCAGGCCCT GACCTTCGTC
TGCGTGGGCC TGGTGGCCGT GTTCACGCGC GGCATGGTGC AGCGCCTGCT GATCCTGGTG
GGCCTGATCG CCGCCAGCCT GCTGTACGGC CTGTTCACCA ATGTGCTGGG CATGGGCAAG
CCCGTGGACC TGTCGGGCGT GATCAATGCC GCCTGGTTCG GCCTGCCCCA ATTCCACGCG
CCCGTGTTCA GCGGCCCGGC CATGGTGCTC ATCGTGCCCG TGGTCATCAT CCTGGTGGCC
GAGAACCTGG GCCACATCAA GGCCGTGACC GCCATGACCG GCAAGAACCT GGACCAGTAC
ATGGGCCGGG CCTTCATCGG CGACGGCGTG GCCACCATGG TCAGCGGCGC GGCCGGCGGC
ACCGGCGTGA CCACCTATGC CGAGAACATC GGCGTGATGG CCGCCACGCG CATCTACTCG
ACGGCCGTGT TCTTCGTGGC CGCCGTCCTG GCCGTGCTGC TGGGCTTCTC GCCCAAGTTC
GGCGCGCTGA TCCAGGCGAT CCCGCTGCCC GTGATGGGCG GCGTGTCCAT CGTGGTGTTC
GGCCTGATCG CCGTGGCCGG CGCCAAGATC TGGGTGGACA ACCGCGTGGA CTTCTCGCAG
AACAAGAACC TGATCGTGGC GGCCATCACC CTGATCCTGG GCACGGGCGA CTTCACGCTC
AAGTTCGGCG ACTTCGCGCT GGGCGGCATC GGGACCGCGA CTTTCGGCGC CATCATCCTG
TACGCGCTGC TGGATCACGC ACGCGACGAT CAGCCACTGA TTCACTGA
 
Protein sequence
MGLFQWTEKS ANQLQRGGVI GPDERLPWPQ TGLMGIQHVI AMFGSTVLAP ILMGFDPNVA 
VLMSGIGTLI FFLITGGKVP SYLGSSFAFI GVVIAATAYG GKGANGNIGV ALGGIIACGA
VYALIGLVVQ MVGTRWIERF MPPVVTGAVV AVIGLNLAAI PVKNMAANNF ESWMQALTFV
CVGLVAVFTR GMVQRLLILV GLIAASLLYG LFTNVLGMGK PVDLSGVINA AWFGLPQFHA
PVFSGPAMVL IVPVVIILVA ENLGHIKAVT AMTGKNLDQY MGRAFIGDGV ATMVSGAAGG
TGVTTYAENI GVMAATRIYS TAVFFVAAVL AVLLGFSPKF GALIQAIPLP VMGGVSIVVF
GLIAVAGAKI WVDNRVDFSQ NKNLIVAAIT LILGTGDFTL KFGDFALGGI GTATFGAIIL
YALLDHARDD QPLIH