Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_0003 |
Symbol | |
ID | 5745539 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 2865 |
End bp | 5444 |
Gene Length | 2580 bp |
Protein Length | 859 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641295066 |
Product | DNA gyrase, B subunit |
Protein accession | YP_001561035 |
Protein GI | 160895453 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.202279 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGACG AGAACAAGCC AGAAAACCAG ACCATTGCCC CCGAAGGCTC AGACTCCAGC GGCTATGGCG AAGGCGCGAT CCAGATCCTC GAAGGCCTGG AGGCCGTGCG CAAGCGCCCC GGCATGTACA TCGGCGATAC CTCCGATGGC ACGGGCCTGC ACCACCTGGT CTTCGAAGTG GTGGACAACT CCATCGACGA AGCCCTGGCC GGCTACTGCG ACGACATCCT GGTCACCATC CATGCCGATG GCTCCCTGTC CGTCATCGAC AACGGCCGCG GCATCCCCAC GCGCGTGAAG ATGGACGACA AGCACGAGCC CAAGCGCTCG GCGGCCGAGA TCGCCCTCAC CGAACTGCAC GCGGGCGGCA AGTTCAACCA GAACAGCTAC AAGGTCTCGG GCGGCCTGCA CGGCGTGGGC GTGTCCTGCG TGAACGCGCT GTCCATCTGG CTCAAGCTCA ACGTGCGCCG CGATGGCGAG GTCTACGAAA TCGACTTCTC GCGCGGCCAC GTGCAGAACC GCCCGATCGA GATCGTGGAC GGCGTCGAGG TCTCGCCCAT GCGCGTGGTC GGCAAGAGCG ACAAGCGCGG CACCAAGGTC CACTTCCTGC CCGACACGGA AATCTTCACG CAGAACCATG AGTTCCGCTA CGAGATCCTG GCCAAGCGCC TGCGCGAACT GTCCTTCCTG AACAACGGCG TGCGCATCCG CCTCAAGGAC GAGCGCGACG GCCGCGAAGA CGACTTCTCC GGCGCCGGCG GCGTCATGGG ATTCGTGCAG TTCATCAACG CCAACAAGAA GGTGCTGCAT CCCACGGCCT TCCACGCCAA CGGCACGCGT CCTGCGGAAA GCTACGGCGG CATCCCCGGC ACCGAGATCG GCGTCGAAGT CGCCATGCAG TGGAACGACA GCTATGCCGA GCAGGTGCTG TGCTTCACCA ACAACATCCC GCAACGCGAC GGCGGCACCC ACCTGACGGG CCTGCGCGCC GCCATGACGC GCGTGATCGG CAAGTACATC GAGCAGAACG AACTGGCCAA GAAGGCCAAG GTCGAGGTCA GCGGCGACGA CATGCGCGAA GGCCTGTGCT GCGTGCTGTC CGTCAAGGTG CCCGAACCCA AGTTCAGCAG CCAGACCAAG GACAAGCTGG TCTCCAGCGA AGTGCGCGCG CCCGTGGAGG ACATCGTCGC CAAGGCGCTG ACCGACTACC TGGAAGAAAA GCCCAACGAC GCCAAGATCC TGTGCAGCAA GATCGTCGAT GCCGCGCGTG CCCGCGAGGC CGCGCGCAAG GCCCGCGAGA TGACGCGCCG CAAGGGCGTG CTCGACGGCA TGGGCCTGCC CGGCAAGCTG GCCGACTGCC AGGAAAAAGA CCCGGCGCTG TGCGAGATCT ACATCGTCGA GGGTGACTCC GCCGGCGGCT CCGCCAAGCA AGGGCGCGAC CGCAAGTTCC AGGCCATCCT GCCGCTGCGC GGCAAGATCC TGAACGTGGA AAAGGCCCGC TACGAAAAGC TGCTGACCAG CAACGAAATC GTCACCCTGA TCACGGCCCT GGGCACCGGC ATCGGCAAGG CCACGGCCGA ATCGGGCAAG AGCGGCAGCG ACGACTTCGA CCCCAACAAG CTGCGCTACC ACCGCATCAT CATCATGACC GACGCGGACG TGGACGGCGC CCACATCCGC ACCCTGCTGC TGACCTTCTT CTACCGCCAG ATGCCGGACC TGGTCGAGCG CGGCCACATC TACATCGCCC AGCCGCCGCT GTACAAGGTC AAGAACGGCA AGGAAGAGCT GTACATCAAG GACGGCCCCG CGCTCAACCA GTACCTGCTG CGCATCGCGC TGATGAACGC CAGCGTCAGC ACCGGCGGTG CCAACCCGCG CACGCTGGAC GGCGAGGAAC TGGCCAAGCT GGCCAACATG CACCTGGCTG CCGAGACCGT CATCGACCGT CTGTCCAACT TCATGGATGC CGAGGCCCTG CGCGCCATCG CCGACGGCGT GCAGATCACG CTGGACAGCA TCGAGGCGGC ACAGGCCTGT GCCCCCATCC TGGAGGCCAA GCTGCGCGAG TTGACCACCA CGGGCGTGCC CGCCGAGGTC ACGGCCGAAA TCGATCCAGT CTCCGAAAAG CCCGTGCTGC GCATCAGCCG CCACCACCAC GGCAACATCA AGAGCTCCAT CCTCACCCAG GAGTTCGTGC GCAGCCACGA CTACGCCGCG CTGGCCGACG AAGCCCAGAA CTTCAACGGC CTGCTGGGCG AAGGCGCCAA GGTCACGCGT GGCGAAGGCG AAAAGGCCAA GAGCGACAAG GCCGGCGACT TCCGCCAGGC CATGCAATGG CTGCTGCACG AGGCCGAACG CACCACGGCC CGCCAGCGCT ACAAGGGCCT GGGCGAAATG AACCCCGAGC AGCTGTGGGA AACCACAATG GACCCCACCG TCCGCAGCCT GCTGCAGGTG CAGATCGGCG ACGCCATCGA GGCCGACCGC GTGTTCACCA TGCTCATGGG CGATGAAGTG GAGCCACGCC GGGAATTCAT CGAGACGAAT GCGCTGCGGG CGGGCAATAT CGACGTGTGA
|
Protein sequence | MTDENKPENQ TIAPEGSDSS GYGEGAIQIL EGLEAVRKRP GMYIGDTSDG TGLHHLVFEV VDNSIDEALA GYCDDILVTI HADGSLSVID NGRGIPTRVK MDDKHEPKRS AAEIALTELH AGGKFNQNSY KVSGGLHGVG VSCVNALSIW LKLNVRRDGE VYEIDFSRGH VQNRPIEIVD GVEVSPMRVV GKSDKRGTKV HFLPDTEIFT QNHEFRYEIL AKRLRELSFL NNGVRIRLKD ERDGREDDFS GAGGVMGFVQ FINANKKVLH PTAFHANGTR PAESYGGIPG TEIGVEVAMQ WNDSYAEQVL CFTNNIPQRD GGTHLTGLRA AMTRVIGKYI EQNELAKKAK VEVSGDDMRE GLCCVLSVKV PEPKFSSQTK DKLVSSEVRA PVEDIVAKAL TDYLEEKPND AKILCSKIVD AARAREAARK AREMTRRKGV LDGMGLPGKL ADCQEKDPAL CEIYIVEGDS AGGSAKQGRD RKFQAILPLR GKILNVEKAR YEKLLTSNEI VTLITALGTG IGKATAESGK SGSDDFDPNK LRYHRIIIMT DADVDGAHIR TLLLTFFYRQ MPDLVERGHI YIAQPPLYKV KNGKEELYIK DGPALNQYLL RIALMNASVS TGGANPRTLD GEELAKLANM HLAAETVIDR LSNFMDAEAL RAIADGVQIT LDSIEAAQAC APILEAKLRE LTTTGVPAEV TAEIDPVSEK PVLRISRHHH GNIKSSILTQ EFVRSHDYAA LADEAQNFNG LLGEGAKVTR GEGEKAKSDK AGDFRQAMQW LLHEAERTTA RQRYKGLGEM NPEQLWETTM DPTVRSLLQV QIGDAIEADR VFTMLMGDEV EPRREFIETN ALRAGNIDV
|
| |