Gene DET1575 details

Gene Information

• Locus tag: DET1575
• ID: 3229141
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides ethenogenes 195
• Kingdom: Bacteria
• Replicon accession: NC_002936
• Strand: -
• Start bp: 1417209
• End bp: 1419062
• Gene Length: 1854 bp
• Protein Length: 617 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 637121133
• Product: hydrogenase membrane subunit
• Protein accession: YP_182272
• Protein GI: 57233678
• COG category: [C] Energy production and conversion; [P] Inorganic ion transport and metabolism
• COG ID: [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAGCGG GTTTTTGGCT CGGCGGGGGT ATTTTGCTGC TTTTTGCCGC CTTGGCGGGC 
ATAGTCTTCA ATCACGGCGG CAAAAAAGTC TGGCAGGCGG TGCTGTGGCT GATTATAGCG 
GCAGCGGTAT GCCTGATTTG CGGGTCTTTA GGGGTATTTT TCGGTAACCC GCTGGATATT 
TCCCTCTGGA GTATTGCACC CGGGCTGGAT ATAGCTTTCT ATATTGACCG TCTGGCCTCA 
TTTTTTATCC TGATAATCAG CCTGGTTTCA CTCTGCGTGG CAATTTATTC GCTGGGTTAC 
AATAATCACC TGTTTTCCAA TGAACGTGCC AACCTGCTTT CAGCCTTTAT GGGTATTTTC 
ATATTTTCCA TGGCCGGGGT GGTGGCCTCA GCCAATACTT TCAGCCTGTT ATTCTTCTGG 
GAGATAATGG CGCTTAGCTC CTTTTTCCTG ATGATGAATG ATTATCAGGC GGTATTTACC 
CAGCGGGCCG GCGTCTATTA TTTCGTGCTT ACCCAGCTTA GCACTGTTTT CCTGATGCTG 
ATGGCTGTGG TTATGTATAT CCAAAACGGC AGTTTTGAAC TCAGCCTTGA CGGTGCGCCG 
TCCGGTATCC AAAGCCTCGT TTTTGTACTG GCATTTCTGG CTTTTGGGAT AAAGGCCGGT 
ATCATCCCCC TTCACAAGTG GCTGCCTTAT GCCCACTCAG CCAGCCCCTC CAATATTTCC 
GCCCTGATGT CCGGGGTAAT GCTCAAGGTG GCTATTTACG GTCTGGTACG CTTCCTTATG 
GATGTGCTCA GTCCGGAAAT ATGGTGGGGG GTGGTCATAC TCCTTTTGGG AGCGGTCAGC 
GCCTTGCTGG GGGTAATATA CGCCCTGAAA GAGCATGACC TTAAAACTTT GCTGGCTTTC 
CACAGTATTG AAAATATCGG CATTATCCTG ATGGGTATCG GGCTGTATGT TATTTTCGGT 
CTGTACGGGC AGGATACTTT AGCCCTGCTG GCACTCGGTT CAGCTTTATT CCACAGCCTG 
AACCATGCCA TCTTTAAAAG CCTGCTGTTT ATGACTGCCG GGTCGGTGGT TATGGCAGTG 
GGTGACCGTA ATATTGAAAA AATGGGCGGG CTGGTGAAGC TGATGCCCTA CACTTCGGTT 
ATCTTTCTGG TGGGGGCGGT TTCCATATCC GCCCTGCCGC CTTTCAATGG TTTTATGAGT 
GAGCTGATGC TCTTTGAGTC TTTCTTCCAG TCATTTTCTC TGGCTGAAAG CAGCATAAAG 
ATACTTCTGT TCAGTGTGCT GGCCATACTG GCGCTTACTT CGGCTCTGGC GGCTGCCTGT 
TTTGTAAAGG CTTTCGGGGC GGTCTTTCTG GCCATGCCCC GCAGTCAGGA AGCAGCCTCG 
GCTAAGGAAG TTTCAAAAAG CATGATTATC GGGCCGGCCA TACTGGCAGT TGCCTGTCTG 
GTACTGGGTC TTTTTGCGGT TCAGGTATTC CAGTCGGCAG GTTACAGTTT TGATCTGCCT 
GATATGTCAC TGGTTGGCCT GGTGCTGGTT ATATTCGGGG TTTTGGTCTT CGGTATGGTC 
AGGCTGTTTT CACCCCGGAA AAGCCGCCGG AGTGAGACAT GGGCTTGCGG ATATATCCGC 
CCCACCCCCC GCTTTGAGTA TACCGCCACC GGCTTTGCCG AACCTCTTTT CCAGATATTC 
CGGCTGATAT ACCGCACCCG CCACTACAAT GAACGCAGTT ACGAAGATAA CCAGCAGGCT 
ATTTTCAAGC AGGGCAAGTC CGCCATTCAT ACCTTAAAGT TTTTTGATGA GTATATTTAC 
CTGCCAATTG CCGGTTTCTT CGGGCGTATT TCCCGTTTCG TATCCCGCCT GTAG 

 

Protein sequence

MTAGFWLGGG ILLLFAALAG IVFNHGGKKV WQAVLWLIIA AAVCLICGSL GVFFGNPLDI 
SLWSIAPGLD IAFYIDRLAS FFILIISLVS LCVAIYSLGY NNHLFSNERA NLLSAFMGIF 
IFSMAGVVAS ANTFSLLFFW EIMALSSFFL MMNDYQAVFT QRAGVYYFVL TQLSTVFLML 
MAVVMYIQNG SFELSLDGAP SGIQSLVFVL AFLAFGIKAG IIPLHKWLPY AHSASPSNIS 
ALMSGVMLKV AIYGLVRFLM DVLSPEIWWG VVILLLGAVS ALLGVIYALK EHDLKTLLAF 
HSIENIGIIL MGIGLYVIFG LYGQDTLALL ALGSALFHSL NHAIFKSLLF MTAGSVVMAV 
GDRNIEKMGG LVKLMPYTSV IFLVGAVSIS ALPPFNGFMS ELMLFESFFQ SFSLAESSIK 
ILLFSVLAIL ALTSALAAAC FVKAFGAVFL AMPRSQEAAS AKEVSKSMII GPAILAVACL 
VLGLFAVQVF QSAGYSFDLP DMSLVGLVLV IFGVLVFGMV RLFSPRKSRR SETWACGYIR 
PTPRFEYTAT GFAEPLFQIF RLIYRTRHYN ERSYEDNQQA IFKQGKSAIH TLKFFDEYIY 
LPIAGFFGRI SRFVSRL