Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DET1559 |
Symbol | |
ID | 3229173 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides ethenogenes 195 |
Kingdom | Bacteria |
Replicon accession | NC_002936 |
Strand | - |
Start bp | 1404340 |
End bp | 1405788 |
Gene Length | 1449 bp |
Protein Length | 482 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637121117 |
Product | reductive dehalogenase, putative |
Protein accession | YP_182256 |
Protein GI | 57233710 |
COG category | [C] Energy production and conversion |
COG ID | [COG1600] Uncharacterized Fe-S protein |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence [TIGR02486] reductive dehalogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.206091 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTAGTT TTCACTCAAT AGTAAGCAGA AGGGATTTTA TGAAAGCCCT TGGTCTGGCA GGAGCCGGAG TTGGGACAAC TGCGGCTGTA GCCCCGGTGT TTCGTGATCT GGATGAAGTA ATATCTACCT CAGCTGAAAG TGATTATGCT AATCCCTGGT GGGTAAAAGA AGTAGACCAA CCAACTACCG AAATTGACTG GAATATATTG CAAAGATTCC AGAAGGGCAG TTATAACAAC TTTACCGCCC ATTTGACAAC TGAAGAAGTA AAAGCTATTC AAGCCAAGAC AAAGCAAGAA GCTATTGCAC GAATGACCAG TTCTTCCAAG CCTGGGCAAA CCCTTCGCGA TAATGCAATT AAAGTGGGTG GTTGGGCTGG TGTGTGGTAC CGGATGACAC AACCAAACCT GACCAAGGAT CTGGTGGAAG GTTGGGATAC TGTTCCTACC CCTGAAATGT TGGGGGTTCC CAAATGGCAA GGCACACCTG AGGAAGGTTC CAATATGATT ACTCAAGCAT TGCGGTTCTT TGGCGCATCT AGTGTTAGTT TTGCCGAGAT AAATGAAAAC ACCCGCAAGA TGATATGGGC ACAGATGCCT CAGGGGACAT ATCCCGATAT AACCTTTGAA GAAGCACCAA AGCCTTCTTT CAACAGTGCT TCAAACAAGG TAATTATTCC GGATACTGGT ATTTATGCAG TAGTGCATAC TGTAAGACAA TCATTGGATA CTTCCAGTAG GGTCGGGTAC CTTTCTGATG GAGCAGCCGG ACAAGCTTAT GACAACTGTG ATATAGCACA GTGGCGTTTA CAGGCATTTC TTAAAGTACT GGGCTATTTT TCTGTCAGCC AGAATATACA GGGCAACGGC CCGATTGTTG GTTGGGGTGT TATGTCTGGG CTTGGCGAAC AAGGCCGTTT GGCACATTTG ATAACTCCGG GTTGGGGACC CATGATTCGT CAGTCAACTA TGAATATTGT AAATCTGCCG GTAGCCCCCA AGAAGCCGAT AGATTTCGGT GCCAGAAAGT TTTGTATTAC CTGTAAAAAA TGTGCTGATC TTTGCCCTTC TGGTGCATTG TCAAAAGAGA CAAAGCTCAC ATGGGATATA GTTCAAGCTT ATGATTCGGT CAAACCAAAC CTTTTCAATA ATCCCGGTTT AAATAACTGG CCACTTGACC ATTTCAAATG TAATCGCTAT TGGAATGAAT CAGATACCTA TTGCGGCGTT TGCCAAGCGG TTTGTGTCTT CAGCAAGGAT GATGCTTCCA GTGTCCACGA AATTGTTAAA GCTACTCTTG CCAAAACTAC AATGCTTAAT AGCTTTTTTG TAAATATGGA CAAAGGATTT GGTTATGGTC TTAAACCTGA AGATACCATT GAAGAATGGT GGACAAATTC ATTCCCTGTA AATGGCATTC ATTACGATAA TGACGCCTAT TACAATTAA
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Protein sequence | MSSFHSIVSR RDFMKALGLA GAGVGTTAAV APVFRDLDEV ISTSAESDYA NPWWVKEVDQ PTTEIDWNIL QRFQKGSYNN FTAHLTTEEV KAIQAKTKQE AIARMTSSSK PGQTLRDNAI KVGGWAGVWY RMTQPNLTKD LVEGWDTVPT PEMLGVPKWQ GTPEEGSNMI TQALRFFGAS SVSFAEINEN TRKMIWAQMP QGTYPDITFE EAPKPSFNSA SNKVIIPDTG IYAVVHTVRQ SLDTSSRVGY LSDGAAGQAY DNCDIAQWRL QAFLKVLGYF SVSQNIQGNG PIVGWGVMSG LGEQGRLAHL ITPGWGPMIR QSTMNIVNLP VAPKKPIDFG ARKFCITCKK CADLCPSGAL SKETKLTWDI VQAYDSVKPN LFNNPGLNNW PLDHFKCNRY WNESDTYCGV CQAVCVFSKD DASSVHEIVK ATLAKTTMLN SFFVNMDKGF GYGLKPEDTI EEWWTNSFPV NGIHYDNDAY YN
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