Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DET1413 |
Symbol | clpB |
ID | 3229274 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides ethenogenes 195 |
Kingdom | Bacteria |
Replicon accession | NC_002936 |
Strand | + |
Start bp | 1281621 |
End bp | 1284059 |
Gene Length | 2439 bp |
Protein Length | 812 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637120973 |
Product | chaperone ClpB |
Protein accession | YP_182121 |
Protein GI | 57233811 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGACAGG AAAAATTTAC CGAACAAGCC CAGGAAGCCC TCAGTGCTTC ACAGATGCTG GTGCAGGAAT ACCAGCACAG CCAATGGGAC GTTGAACATG TGCTGCTGGC CCTTATCCGT CAGGAAAAGG GGCTGGTGGG TGAAATACTA AAAGAACTTA AAGTAAGCTC AGAGGAAATA ACCAAGCAGC TGGTGGACTC TTTAAAGCGT TCGCCCAAAG CGGTAGGCGG CAATATCCAG ATATACCCCA CCCCCCGTAT TATAAACCTG CTGCAAACCG CCAACAACGA AGCAGAGCGC CTGCGGGACG AGTTTATCGG CACGGAACAT TTGCTGGTGG CCATTGCCGG AGATACCCAG GGAGAATCTG CCCGAATTTT GAAGCAGTTT GGTATTGACC AGGAAAAAGT TTATTCCGCC CTCCAAAAAA TACGGGGCGG ACACAGGGTG ACCGATGCCA GAGCCGAAAG CAAATACCGG GCACTGGCCA AATACAGCCG CGACCTTACC GAACTGGCCA AACAGGGCAA AATAGACCCG GTAATAGGCC GTGACCAGGA AATCCGCCGG GTTATGCAAA TACTCTCCCG CCGCACCAAA AACAACCCGG TGATTGTGGG TGAAGCGGGC GTGGGCAAAA CTGCCATTGC CGAAGGGGTT GCCCAGAAAA TTGCGGATAA TGACGTACCC GAATCCCTGC GTGACCGCAA GGTAATGGCC CTGGATATGG GCGCTCTGGT TGCCGGAAGC AAGTTCCGCG GAGAGTTTGA AGAACGCCTC AAAGCGGTCA TGGACGAGGT GCGCCAATCC GCCGGAGAGA TTATCCTTTT CATAGACGAA ATCCATACCG TAGTCGGGGC GGGAGCGGCT GAGGGAGCTA TAGATGCCTC AAATATGCTC AAACCGGCTT TGGCCAGAGG TGAACTTCAG ACAATAGGGG CTACCACTCT GGATGACTAC CGCAAATATA TTGAGAAAGA TACCGCTCTG GAGCGCCGTT TCCAGCCGGT GTTTGTAGAC GAGCCTACAG TTGAACAGAC TATTGAAATA TTAAAGGGCA TCAGACCCAA ATACGAAGCC CACCATAAAC TGAAAATAAC TGACGCCGCT CTGGAGGCAG CCGCCAGACT GTCCAGCCGC TATATAACCG AACGCCAGCT GCCGGACAAG GCGATAGACC TTATTGACGA GGCAGCCAGT AAACTCCGGC TGGACAGCGA AAGCGCCCCG CCGGAAGTAA AAAAACTGGA AGATGAACTC CGCCAGGCAG GCATTGAGGA AGAGGCCGCC TCCCAGCTTC AGGAATACGA AAAAGCGGCT GAACTCAAGG CTGAAAAGAT GCGTCTTGAG GAAAAATTCA ACACTGCCCG CGAGGATTGG CTGAAACAGG AGAAAATAGC CGAAGAAGTA ACCGCCGAAC AGATTACCAC CTTGGTTTCG TCTATGACCG GCATACCGGT CAGCCAGATG CTGGAAGGTG AGGCTTCCAA ACTGCTGAAT ATGGAAGACC GCATCCACGA GCGTATGGTA GACCAGGAGG AAGCGGTAAA AGCCGTAGCC GAAGCTATCC GCCGCAGCCG GGCCGGTCTT AAAGACCCGC GCCGTCCCAT CGGCAGCTTT TTGTTCTTAG GCCCGACCGG GGTTGGCAAA ACCGAACTTG CCCGCAGCTT AGCCTGGTTT TTGTTTGATG ACGAAACCGC CATGGTCAGG CTGGACATGT CCGAATATCA GGAAAAACAC ACTGTTTCCC GTCTGGTAGG TGCTCCCCCC GGATACGTGG GCTACGACGA AGGCGGGCAG CTGACTGAAC TGGTTCGCCG CCGCCCGTAC CGGGTTATCC TGCTGGACGA AATTGAAAAA GCCCACCCGG ATGTATACAA CACCCTGCTC CAGCTGCTGG ATGACGGCCG CCTGACAGAC GGGCAGGGCA GAACGGTGGA CTTTAAAAAC ACGGTTATCA TTATGACCTC CAACGCAGGC ATAGAAACTA TCAAACGCGA ATCTGCCCTG GGTTTTGCCG TCAGGACTGA TGACTCCAAA ACCCGCCATG ACGGCTATGA ACGCATGAAA GACAAGGTCA TGGCCGAGGT TAAAAAGACC TTCCGCCCGG AGTTTATCAA CCGGGTAGAC GAAATAATTG TCTTCCATGA GCTGGCCGAA GAACAGATAC GCCAGATAGT GGATTTCATA ATAAAAGATG TTTCCAAACG GCTTGAAGAA CGCAAACTCA AGCTGGAGCT GACCGATGCC GCCAAAGGCT GGCTGGCCAA GGTGGGTTAT GACCCGGCCT TTGGTGCCAG ACCCCTTCGC AGGGCCATTG AAAGATACAT AGAAAGCCCG CTGGCTGACA AGCTGCTTCG CAATGAGTTC AGCGAAAATG CTACAATACT GGTGGACAAG GCGGATGAAG CCCTGAGTTT CAGCCAGAAG GCCGCCTGA
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Protein sequence | MRQEKFTEQA QEALSASQML VQEYQHSQWD VEHVLLALIR QEKGLVGEIL KELKVSSEEI TKQLVDSLKR SPKAVGGNIQ IYPTPRIINL LQTANNEAER LRDEFIGTEH LLVAIAGDTQ GESARILKQF GIDQEKVYSA LQKIRGGHRV TDARAESKYR ALAKYSRDLT ELAKQGKIDP VIGRDQEIRR VMQILSRRTK NNPVIVGEAG VGKTAIAEGV AQKIADNDVP ESLRDRKVMA LDMGALVAGS KFRGEFEERL KAVMDEVRQS AGEIILFIDE IHTVVGAGAA EGAIDASNML KPALARGELQ TIGATTLDDY RKYIEKDTAL ERRFQPVFVD EPTVEQTIEI LKGIRPKYEA HHKLKITDAA LEAAARLSSR YITERQLPDK AIDLIDEAAS KLRLDSESAP PEVKKLEDEL RQAGIEEEAA SQLQEYEKAA ELKAEKMRLE EKFNTAREDW LKQEKIAEEV TAEQITTLVS SMTGIPVSQM LEGEASKLLN MEDRIHERMV DQEEAVKAVA EAIRRSRAGL KDPRRPIGSF LFLGPTGVGK TELARSLAWF LFDDETAMVR LDMSEYQEKH TVSRLVGAPP GYVGYDEGGQ LTELVRRRPY RVILLDEIEK AHPDVYNTLL QLLDDGRLTD GQGRTVDFKN TVIIMTSNAG IETIKRESAL GFAVRTDDSK TRHDGYERMK DKVMAEVKKT FRPEFINRVD EIIVFHELAE EQIRQIVDFI IKDVSKRLEE RKLKLELTDA AKGWLAKVGY DPAFGARPLR RAIERYIESP LADKLLRNEF SENATILVDK ADEALSFSQK AA
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