| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET1394 |
|---|
| Symbol | argF |
|---|
| ID | 3229331 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides ethenogenes 195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002936 |
|---|
| Strand | + |
|---|
| Start bp | 1260764 |
|---|
| End bp | 1261699 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 637120955 |
|---|
| Product | ornithine carbamoyltransferase |
|---|
| Protein accession | YP_182103 |
|---|
| Protein GI | 57233867 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0078] Ornithine carbamoyltransferase |
|---|
| TIGRFAM ID | [TIGR00658] ornithine carbamoyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.819554 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAACACCA AGGACCTGCT GTCTATTTCA GACCTTTCCC CTGACGATAT CGGGCGTCTG
CTTTCAGATG CCATTGAACT TAAAGCCAGG GGCTGGAACA GCTGTCTTTC CGGTAAAACT
CTGGCTCTGG TCTTTGAAAA ACCCTCCCTG CGTACCCGGG TCAGCTTTGA GCTGGCCATG
AAGCAGCTGG GCGGGGAAGC ACTGTATCTT TCACCGGCTG AGGTAGGTTT GGGCAAACGC
GAACCGGTGG CTGACGTGGC CAGAGTGCTA GCCCGTTTTG TAGACGTTAT CGCCTGCCGC
ACCTTCGGGC ATGATACCCT GGTACAGCTG GCAAAATATG CCGATATACC TGTTATAAAC
GCCCTTTCAG ACTTGGAGCA CCCCTGCCAG GCACTGGCGG ATATCCTGAC CATTTACGAG
AAAAAGGGCG AACTCAAGGG GCTTAATCTG GCTTACATAG GTGATGGCAA CAACTGTGCC
AACAGCCTTT TGCTGGCCTG CGCCATGACG GGAATAAACT GCCGCTTGGC TTCACCCGAA
GGCTATCTGG TAGACAAGGC CATATTTGCT AAGGCCAAAG CTTACGCAGA AGACAGCGGG
GCTGAACTAT ACAGCGGGAC AGACCTTAAG GCCGCCCTCC GCGGGGCTGA CGTAATCTAT
ACAGATGTCT GGACCAGTAT GGGACAGGAA GCTGAAACTG AAAAACGCCT TAAGGATTTT
GCGGGTTTTC AGGTGAATGC CAAGCTGGTT TCCATGGCTG ATAAAGATGC CATCATTATG
CACCCTCTGC CGGCTCATTA CGGTGAAGAG GTTGACCGGG AAATACTGGA ATGCCCTCAG
TCTGTTATCT TTGACCAGGC CGAAAACCGG CTGCATGCCC AAAAGGCGGT ACTAAGAGAT
ATGCTGGGTG GACTGGAGAT AGGCGGCAGG CACTAA
|
|---|
| Protein sequence | MNTKDLLSIS DLSPDDIGRL LSDAIELKAR GWNSCLSGKT LALVFEKPSL RTRVSFELAM
KQLGGEALYL SPAEVGLGKR EPVADVARVL ARFVDVIACR TFGHDTLVQL AKYADIPVIN
ALSDLEHPCQ ALADILTIYE KKGELKGLNL AYIGDGNNCA NSLLLACAMT GINCRLASPE
GYLVDKAIFA KAKAYAEDSG AELYSGTDLK AALRGADVIY TDVWTSMGQE AETEKRLKDF
AGFQVNAKLV SMADKDAIIM HPLPAHYGEE VDREILECPQ SVIFDQAENR LHAQKAVLRD
MLGGLEIGGR H
|
|---|
| |