Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DET1381 |
Symbol | |
ID | 3229350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides ethenogenes 195 |
Kingdom | Bacteria |
Replicon accession | NC_002936 |
Strand | + |
Start bp | 1246384 |
End bp | 1248762 |
Gene Length | 2379 bp |
Protein Length | 792 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637120943 |
Product | GGDEF domain/HD domain-containing protein |
Protein accession | YP_182092 |
Protein GI | 57233885 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain [COG2206] HD-GYP domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain [TIGR00277] uncharacterized domain HDIG |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCCATC TGGACGCCCC GCCGGAACAA ACCCTGTTCT GGCACAACCT GCTAAATATT GCTCTCTTTA CCGCCATACT TATGTATTAC CAGTTTATCC ATGTCTATAC CAACCGTAAA AACAACCTTT TCCTGATAAT AGGTTATATT ACACTGGCCC TGGATATTTT CTTCAATCTG AACGGACAGC TGGTTACCTC TGCTTATATA GAGGACAATA TCGTTTACCA CACCACTACT CCATTATTTT ATTATATTTT TACATTTGCC CTGCTGTTCA TAGGGGTTAT CATTTATCAT CTGGTACACA AATACCGCCA ATCTACAGAC CCGGCCGAAC GCAACCGCAC CCTGTACCTG GTACTGGGGT GGGTAATTGT AGTTCTTTCA AGCTATACCA ATCTTAGTGA CAACCCCCGC ATCTACGGCC TGCCCCTTGA CCATGTGGGC AACTTTATAA ACGCGGGAAT TATTGTCTAC GCCATAACCC AGTACCGCCT GATAGACATT AAACTGATAG CCCGCAAGAC CCTTACCTAT GTTCTTTTGT TTTTCTCCAT GATAACCATA TATGCAGGCG CTTTATTTGT AGCTACACGT ATATTCCCCG CCGAAGAAAT GTCTACTATA ATCCTTATGG CAACCCTGAT TGTGCTGATA CTGGCCATGA CCGCCCGCCC TCTAAGAACA CTTATTGAAA AACGCATAGA CAGGTTATTT TATCAGGAGA CCTATGAATC CCGTCTAGCG CTTATGGGTT TTTCACGCAA GATGGGTAAC ATACTTAATC TGGAGGAACT GGCCAAATCA CTGCTACCTG ACCTGGCTAA ATCTTTAAAT GTAAACAAAA CCGCCCTCCT TTTCCCGGAT GCTGCCAGCG GTGAGTTTTC CCTGCAATAT GTTTACCCCG GTGATGACCA GCTGAAAACC CATTTCAAAC TGGCTTCCGA TAACCCTGTC ATTGCCTGGC TGGATAAGAA CAATGCCCAG TTATACCTGA ATAAACTGGA TACTTTACCG GAACTGAAGG GCTTATGGCA GATAGAGAAA GAGCAGCTCC AGAAATCAGA GATGGGGTTA CTCTATCCCA TAAAAAGCCG TGATAAGCTG ATAGGCATTA TCGGGCTGGG CAACAAAAAA CGGGGGGGCA TATATTCCAC CGGAGATTTG GACCTGCTGA TAAGTGTAGC CAATCAGGCC GGTATTATAA TAGAAAATGC CCAGCTTTAT ACTCAGGCCA CTATCCGTGC CAATACCGAC GAACTTACCC GCCTGTATAA TCACCGCCAC TTTCATGAGC GCATAGAACA GGAAATAGCC CGTGGTTCAC GCTTCGGCAA TACCTTTTCC CTGATACTGC TTGACCTTGA CCTCTTTAAG GTCTACAACG ACGTATACGG CCATCTGGCA GGTGACCAAC TGCTCCGCAG GCTGGGTAAA ATACTGGAAA ATTCCATCCG CTCTATTGAT ATGGCCTTCC GCTACGGAGG CGAGGAATTT GCCATAATGC TGCCCGGCAC TAAGATTGAA GATGCTTATC ATGTAGCCGA ACGTATCCGC AAAAATGTTG AGACCAAGTC TTCCTTCCGT GATATGCCCA TAACCGCTTC CCTGGGTCTG GCTAACTGGC CGAATGACGG GATAATGAAG GAAGAGATTA TAGCCAAAGC TGATGCCGCC CTGTACCACT CCAAAGAGAC AGGACGAAAC CGTACCAGTC TGCCTGCCGA GTTGAATAGC AACCCCACCC AGGTAATCAA CTCCGAGCTG GAGGCCCGTC CCAAGGCTAT GTCCATTATT TATGCTTTAG CGGCCACGGT TGATGCCAAG GACCATTATA CTTACGGGCA TTCGCGCAAG GTAAGTGAAT ATGCAGTAGC CCTGGCAGAA ATATTAAAAC TGCCTGAGGA AAAAGTGGAA AACATACGGG CGGCCGGACT GCTGCATGAT ATAGGCAAAA TAGGCGTACC CGACCATATT CTGACCAAGC CATCTGCTTT GGACGATGAA GAATGGGAGC CTATTAAAAC CCACCCGGAA CTGGGGGTGG AAATACTGAA GCGGATAATT GACCTGGTAA ACTGCCTGCC GGCAATACTC CATCACCATG AACACTTTGA CGGCAGCGGA TACCCGTTTG GGCTTAAGGG CGAAAACATA CCTCTGGAAG CCAGAATACT CAGTATTGCA GATGCCTATG ATGCGGTTAC CTCACCCCGC CCCTACCGCA CCCAACTCCA TACCGAGCAG GCTATAGCCG AACTGAAACG CTGTGCCGGC TCCCAGTTTG ACCCGGCGCT GGTAGATATC TTCTGCCGTG TTATAAAACC GGAAGATAAC CCCCAACTCG AAGCCTCACC GGAAACCGGC ACTGACTAA
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Protein sequence | MLHLDAPPEQ TLFWHNLLNI ALFTAILMYY QFIHVYTNRK NNLFLIIGYI TLALDIFFNL NGQLVTSAYI EDNIVYHTTT PLFYYIFTFA LLFIGVIIYH LVHKYRQSTD PAERNRTLYL VLGWVIVVLS SYTNLSDNPR IYGLPLDHVG NFINAGIIVY AITQYRLIDI KLIARKTLTY VLLFFSMITI YAGALFVATR IFPAEEMSTI ILMATLIVLI LAMTARPLRT LIEKRIDRLF YQETYESRLA LMGFSRKMGN ILNLEELAKS LLPDLAKSLN VNKTALLFPD AASGEFSLQY VYPGDDQLKT HFKLASDNPV IAWLDKNNAQ LYLNKLDTLP ELKGLWQIEK EQLQKSEMGL LYPIKSRDKL IGIIGLGNKK RGGIYSTGDL DLLISVANQA GIIIENAQLY TQATIRANTD ELTRLYNHRH FHERIEQEIA RGSRFGNTFS LILLDLDLFK VYNDVYGHLA GDQLLRRLGK ILENSIRSID MAFRYGGEEF AIMLPGTKIE DAYHVAERIR KNVETKSSFR DMPITASLGL ANWPNDGIMK EEIIAKADAA LYHSKETGRN RTSLPAELNS NPTQVINSEL EARPKAMSII YALAATVDAK DHYTYGHSRK VSEYAVALAE ILKLPEEKVE NIRAAGLLHD IGKIGVPDHI LTKPSALDDE EWEPIKTHPE LGVEILKRII DLVNCLPAIL HHHEHFDGSG YPFGLKGENI PLEARILSIA DAYDAVTSPR PYRTQLHTEQ AIAELKRCAG SQFDPALVDI FCRVIKPEDN PQLEASPETG TD
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