Gene DET1298 details

Gene Information

• Locus tag: DET1298
• ID: 3229363
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides ethenogenes 195
• Kingdom: Bacteria
• Replicon accession: NC_002936
• Strand: +
• Start bp: 1182700
• End bp: 1184529
• Gene Length: 1830 bp
• Protein Length: 609 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 637120860
• Product: GTP-binding protein TypA
• Protein accession: YP_182010
• Protein GI: 57233898
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1217] Predicted membrane GTPase involved in stress response
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR01394] GTP-binding protein TypA/BipA

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGAAAACT ACCAGAGAAC CGATATCCGT AATATTGCTA TTATTGCCCA CGTAGACCAC 
GGCAAAACCA GCCTGGTAGA CGTGATGCTT AAACAAAGCC GCATTTTCCG TGAAAACCAG 
CACGTTGGCG AGCTTATTAT GGACCGAAAC ACCCTTGAAC GGGAAAAAGG CATTACTATT 
CTGGCCAAAA ACACCGCCAT AACCTACCGC GGAGTAAAGA TAAACATCAT TGATACTCCC 
GGACATGCTG ACTTTTCGGG TGAGGTTGAG CGGGTACTGA ATATGGCAGA CGGCTGTCTC 
TTGGTGATTG ACAGTATAGA CGGCCCTATG CCCCAAACCC GTTTTGTGCT TAAGGAAGCC 
ATGCAGAAAA AGCTGAAGCC TATTGTAGTT ATAAACAAGA TAGACCGCGA AAATGCCCGC 
CCTGAAATAG TGCTGGGGCT GGTACAGGAC TTGTTTCTGG AGCTGGCTAC CACCGAGGAA 
CAGCTGGACT TCCCGGTAGT TTATACCTCT GCCCGCGAAG GGTATGCCGT AAATACCCCC 
GGTACAAAAA GCACTGACCT TATCCCCCTG TTTGAGTGCA TACTGGATAA AATTCCCCCG 
CCCAGCATCG CCCAGGGTGA ATTCCAAATG CTTATTTCCA ACCTGGATTA TGATACCCAC 
AAAGGGCGGA TAGCTATCGG GCGCATTCAG CGGGGTAAAA TATGCTCCCA TGACCGGGTA 
GTTAATATAG ATTCCCAAAA TAAAGCTCAC CCTTTTGAAG TGGGTCAGGT ATTTACCTTT 
ATGGGATTGG GCAAACAGGA AGTGGAGTGT GCCGAAGCAG GTGAGATAGT AGCCATTACC 
GGTCTGGAAA ACGCCTCAAT AGGTGATACC GTCACCAGCC CTCTCCAGCC TGAGGCCCTG 
CCCCGCATTG AAATAGGCGA ACCTACTGTC AGAATGACTT TCGGGGTCAA TACCTCACCT 
TTCGGGGGGC GGGAAGGTAA ATTCTGCACC TCACGCCAGC TTCGGGAAAG GCTTTTCCGT 
GAACTGGAGA CCAATATAGG GCTGAGGGTT GAGGAAACTG ATTCGCCGGA CTCATTTTTG 
ATTTCCGGGC GGGGCGAACT CCACCTGTCC ATCCTGGTAG AGACCATGCG CCGCGAAGGG 
TATGAATTTG AAATATCCAA ACCCGAAGCC ATCACGAAAG ATATAAACGG CAAAGTCTAT 
GAGCCGGTGG AAACTCTGAC GATAGATGTC CGCGAGGATT TTGTGGGAGA GGTCACCGAA 
CTTCTGGGTA AACGCCAGGC CCGCATGACT GATATGCACA ATGACGGCGA AGGAAACGTA 
AGGCTGGAAT ATAACATACC CACCCGCGGT CTTATCGGCT TCCGCAACTC GTTCCTGACA 
GCTACCAGAG GCACAGGCGT ACTGAACAGC CAGTTTCTGG ATTTTCAGCC CTGGTGCGGT 
GAAATAGAGC AAAGCCGGAC CGGCGCATTG GTGGCAGCCG AAGCAGGTTT GTCCTGCACT 
TACGGGCTTA ATAACTCACA GGAACGGGGC ATACTGATGA TAGATGCCAA TGTACCTGTG 
TACGAGGGCA TGATAGTCGG CCTGCATGCC AGAGGTCTTG ACCTGGCAGT AAATGTCTGC 
AAGCAGAAAA AGATGACCAA TATCCGTTCG TCTACTTCGG ACATTGCCAT AAAACTGGTG 
CCGCCTATGA AACTCAGCCT TGAGCAATCT ATGGATTTTA TCGCCGAAGA TGAGCTGGTT 
GAGGTCACTC CCAAAAGTAT CCGCCTGCGG AAGAAGATAC TGGATACCGA AATGAGACTT 
AGGGCTCGCA AACGCACTGA AAGTAATTAG 

 

Protein sequence

MENYQRTDIR NIAIIAHVDH GKTSLVDVML KQSRIFRENQ HVGELIMDRN TLEREKGITI 
LAKNTAITYR GVKINIIDTP GHADFSGEVE RVLNMADGCL LVIDSIDGPM PQTRFVLKEA 
MQKKLKPIVV INKIDRENAR PEIVLGLVQD LFLELATTEE QLDFPVVYTS AREGYAVNTP 
GTKSTDLIPL FECILDKIPP PSIAQGEFQM LISNLDYDTH KGRIAIGRIQ RGKICSHDRV 
VNIDSQNKAH PFEVGQVFTF MGLGKQEVEC AEAGEIVAIT GLENASIGDT VTSPLQPEAL 
PRIEIGEPTV RMTFGVNTSP FGGREGKFCT SRQLRERLFR ELETNIGLRV EETDSPDSFL 
ISGRGELHLS ILVETMRREG YEFEISKPEA ITKDINGKVY EPVETLTIDV REDFVGEVTE 
LLGKRQARMT DMHNDGEGNV RLEYNIPTRG LIGFRNSFLT ATRGTGVLNS QFLDFQPWCG 
EIEQSRTGAL VAAEAGLSCT YGLNNSQERG ILMIDANVPV YEGMIVGLHA RGLDLAVNVC 
KQKKMTNIRS STSDIAIKLV PPMKLSLEQS MDFIAEDELV EVTPKSIRLR KKILDTEMRL 
RARKRTESN