| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET1276 |
|---|
| Symbol | fabD |
|---|
| ID | 3229399 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides ethenogenes 195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002936 |
|---|
| Strand | + |
|---|
| Start bp | 1162357 |
|---|
| End bp | 1163289 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637120838 |
|---|
| Product | malonyl CoA-acyl carrier protein transacylase |
|---|
| Protein accession | YP_181988 |
|---|
| Protein GI | 57233934 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0331] (acyl-carrier-protein) S-malonyltransferase |
|---|
| TIGRFAM ID | [TIGR00128] malonyl CoA-acyl carrier protein transacylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00229731 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAGA TTAAAACAGC TTATGTCTTC CCCGGTCAGG GTGCCCAATT CGTGGGCATG
GGCCGGGACT TGTATTCGGA GTTTCATTCC GCCAGAGAGC TTTTTGACCT GGCGGATAAA
GCTTTGGGAT TTTCACTGTC AAAACTGTGT TTTGAAGGGC CGGAAGAAGA CCTTAAGGAC
ACCCGCAACT CCCAAAGCGC CATTGTCGGC CACAGCCTGT GCGCCCTTGC TGCTTTTATA
GAGAGCGGCA AGTCAAATCT CCTGCCAGAG CCTTCTTTTG TAGCCGGGCA TTCGCTGGGT
GAATATTCGG CTTTGGGAGC AGGCGGCATA CTCCCCTACC CGCAGGCTAT TTTGCTTGCC
CGCAAACGGG GGGAACTGAT GGCGGAAGCA GCCGCCAAAA CACCCGGTGC TATGGCTGCC
GTTCTCGGCC TTTCGGAAGA AATACTGGCG GATATCTGCC TTAAAACAGG CTGTTACATA
GCGAATTACA ACTCCCCCGG ACAGCTGGTT ATCAGCGGCC TGAAAGAGAC TGTAGAAAAA
GCTTCTGCCC AAGCCGCAGA GAGCGGTGCT ATGAAGGTGG TACCCCTGCA GGTAAGCGGA
GGGTTTCATA CCCCGCTTAT GTCACCGGCT TCTGCCGGTT TAAAAGCAGT ACTGGATTCT
ACCGGGTTTG ATACGGCCAG AATACCTCTG GTAGCCAATA CCAGCGCCAG CCCGCTTACC
AATCCGCAGG ATATAAAAAG CGAACTGGTC AACCAGCTGA CCGGCGGTGT CCAGTGGCAA
AAAAGCATAG AAAACATGAT TGCTGCCGGG GTAAATACCT TTGTTGAGAT TGGGCCGGGC
AAAGTGCTGG CCGGACTGAT TAAAAGAATT AACCGCAGTG TCAGTATCTA CAATATAAAC
GATGCCGCTT CTATCCAAAA TTTTAGCGTA TAA
|
|---|
| Protein sequence | MTEIKTAYVF PGQGAQFVGM GRDLYSEFHS ARELFDLADK ALGFSLSKLC FEGPEEDLKD
TRNSQSAIVG HSLCALAAFI ESGKSNLLPE PSFVAGHSLG EYSALGAGGI LPYPQAILLA
RKRGELMAEA AAKTPGAMAA VLGLSEEILA DICLKTGCYI ANYNSPGQLV ISGLKETVEK
ASAQAAESGA MKVVPLQVSG GFHTPLMSPA SAGLKAVLDS TGFDTARIPL VANTSASPLT
NPQDIKSELV NQLTGGVQWQ KSIENMIAAG VNTFVEIGPG KVLAGLIKRI NRSVSIYNIN
DAASIQNFSV
|
|---|
| |