Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DET1255 |
Symbol | pilT-2 |
ID | 3229444 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides ethenogenes 195 |
Kingdom | Bacteria |
Replicon accession | NC_002936 |
Strand | + |
Start bp | 1141429 |
End bp | 1142505 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637120817 |
Product | twitching mobility protein |
Protein accession | YP_181967 |
Protein GI | 57233979 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATAGAGG TATATGAACT GCTGAAACTG GTAGTAGACA ACGACGCCTC AGATTTACAT ATCAAAGCCC CTACCGCACC GGTACTGCGC ATAAACGGGG ACCTAATACG CCAGATGCAA TACCCGCCAA TTACTCCGGA AGATGCCGAA CAAATTTTCA CCGCTATTAC TACCCCCCAC CAGCAGGAGA TATTTGCCGC CGAAAATGAA CTGGATTTCG TCTATTCGGT TACCAATCTG GCCCGCTTCC GGGTCAATGT ACTCCGCCAG AGGGGCAGCC TGAGTCTGGC TTTCAGGGTA GTCCCCTTTG CTATCCGCAA CATAGATGAA CTTAAGCTGC CGGTTATCCT TAAAAACCTG ATTATCCGCC CGCGCGGGTT GCTGCTGGTT ACCGGCCCTA CCGGCAGCGG CAAATCCACC ACCCAGGCCG CCATGATAGA GCACCTGAAC AACTGCCGCC GGTGCAACGT GATTACTATT GAAGACCCCA TAGAGTACCT GTTCCATGAC AACGAGTGTA TCATATCCCA GCGTGAGCTT GGGGGAGATA CCCATTCCTT TGCAACGGCC TTAAAACACG CCCTCCGCCA TGACCCCAAC GTAATAGTCA TAGGCGAAAT GAGAGATTTG GAAACCATAT CCACTGCCAT TGCCGCCGCC GAAACAGGCC ATCTGGTAAT AGGCACCCTC CACACTACCG ATGCCCCCCA GACGGTTGAC CGGCTGATAG ATATGTTCCC GCCCTCCCAG CAGCAGCAGA TACGCCTCCA GCTTTCCCAG GTACTGGAAG CCATTATCTC CCAGACCCTT ATTCCCAGAC TGGATAATAA AGGCCGGGTG GCCGCTTTTG AAATATTGAT TGCCACCAAT GCCGCCCGCA ACCTTATCCG CGAAGGTAAA ACGTTTGAAC TGCTGACCAT AATGCAACTG GGCAAAAATG AAGGTATGCA AACACTGGAT AATGAACTGA CCCGCCTGGC AAAAGACGGG GTAATAAGCA CCGAAAACGC TGTTTTGAAA AGCAGTAACC CCGAAAGACT GCGTAAGACC CTGTGCGGTG TGAACCGGGG GACTTAG
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Protein sequence | MIEVYELLKL VVDNDASDLH IKAPTAPVLR INGDLIRQMQ YPPITPEDAE QIFTAITTPH QQEIFAAENE LDFVYSVTNL ARFRVNVLRQ RGSLSLAFRV VPFAIRNIDE LKLPVILKNL IIRPRGLLLV TGPTGSGKST TQAAMIEHLN NCRRCNVITI EDPIEYLFHD NECIISQREL GGDTHSFATA LKHALRHDPN VIVIGEMRDL ETISTAIAAA ETGHLVIGTL HTTDAPQTVD RLIDMFPPSQ QQQIRLQLSQ VLEAIISQTL IPRLDNKGRV AAFEILIATN AARNLIREGK TFELLTIMQL GKNEGMQTLD NELTRLAKDG VISTENAVLK SSNPERLRKT LCGVNRGT
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