Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DET1189 |
Symbol | ribE |
ID | 3229534 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides ethenogenes 195 |
Kingdom | Bacteria |
Replicon accession | NC_002936 |
Strand | - |
Start bp | 1084835 |
End bp | 1085452 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637120752 |
Product | riboflavin synthase subunit alpha |
Protein accession | YP_181902 |
Protein GI | 57234068 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0307] Riboflavin synthase alpha chain |
TIGRFAM ID | [TIGR00187] riboflavin synthase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTTACAG GCATAGTTGA GGAACTTGGC TTTTTAAAAG CCCGAAACCC CGCTTATTTG CACATTGGGG CAAAGCTGGT GCTGGAATCA CTGAAAGTGG GTGACAGCAT AGCGGTCAAT GGCGTCTGTC TGACAGTTAC CAGTTTTGAC AGTTCTTCTT TTCATGCGGA TATCATGCCC GAAACCCTGC GTCTTTCCAA TCTGGGCAAA CTGTCTTCTG ATTCACCTCT AAATCTGGAA CGGGCACTTA CTCTAAACAG CCGAATGGGC GGGCATCTGG TGCAGGGGCA CGTAGACGGC ACTGCCAGGT TAGTTTCCTC CGTACCTGAC GGCAGCGCCC GCCTGCTTAC CTTTGAAACA GACCAAGACC TTACCCGTTA TATGGTTCAT AAGGGATTTG TGGCGGTCAA CGGGGTCAGT TTAACTATTA CAGATTTACA GGCAAAGCGT TTTTCCATTT CGCTGGTGAA CCTGAGCGGC AAATCAACTA ATCTGGGTCT GCTAAAGCCG GGGGATACGG TAAACATAGA AACTGATATA ATAGGTAAAT ACGTGGAGAA ACTGTGCCGG ACAGAACGGG GCATAAGCCC GGAGTTTCTG GCCGAAAACG GTTTTTAA
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Protein sequence | MFTGIVEELG FLKARNPAYL HIGAKLVLES LKVGDSIAVN GVCLTVTSFD SSSFHADIMP ETLRLSNLGK LSSDSPLNLE RALTLNSRMG GHLVQGHVDG TARLVSSVPD GSARLLTFET DQDLTRYMVH KGFVAVNGVS LTITDLQAKR FSISLVNLSG KSTNLGLLKP GDTVNIETDI IGKYVEKLCR TERGISPEFL AENGF
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