Gene DET1188 details

Gene Information

• Locus tag: DET1188
• Symbol: ribBA
• ID: 3229535
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides ethenogenes 195
• Kingdom: Bacteria
• Replicon accession: NC_002936
• Strand: -
• Start bp: 1083591
• End bp: 1084802
• Gene Length: 1212 bp
• Protein Length: 403 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 637120751
• Product: 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II
• Protein accession: YP_181901
• Protein GI: 57234069
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase; [COG0807] GTP cyclohydrolase II
• TIGRFAM ID: [TIGR00505] GTP cyclohydrolase II; [TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.0674576
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCTAATG CCCGTGTTGA AGATGCTATT GCAGATATAA AGGCCGGCCG TTTTGTTATT 
GTAGTAGATG ACTATGACCG CGAAAATGAA GGTGATTTGG TCATGGCCTC TGAAATGGTC 
ACGCCTGATG CCATAAATTT CATGGCAAAA AATGCCCGCG GCCTTATTTG TGTTTCACTC 
ACTGCCGAAA GGCTTGAACA GCTGAAAATA CCTATGATGG TTACGGAAAA TACCTCGCCT 
TACAGCACCG GGTTCACCGT TTCGGTGGAA GCCCGTAAAA AAGTTACTAC CGGTATTTCA 
GCGGCTGACC GGGCGGCTAC AGTGCAGGTT TTGATAGACC CGGCGGCTAC CCGTGAAGAT 
ATTGCCATGC CCGGACATAT GTTCCCCCTG CGCGCCCGCG AAGGCGGGGT GCTGGTACGG 
GCGGGGCATA CCGAAGCCTC TATGGATTTA ACCCGGATGG CCGGGCTGTA CCCTTCCGGT 
GTACTTTGCG AGATTATGAA TGATGACGGC ACTATGGCCC GTCTGCCCCA GCTTGAAGCG 
AAAGCCGCCG AATGGGCTAT AAAGATAATA AGCGTTAAGG ACATAATTTC CTACCGCCGC 
CGTACCGAAA AAATGGTTAA AAAGATAACC GAAGCCGAAC TGCCTACTTC TCACGGACAG 
TTTAAAGCGG TTGCCTATAA AAGCCAGTTT GATGCTGACG AACACATTGC TCTGGTAATG 
GGAGATATCT CCGGCCCGGA GCCGGTTTTG GTCAGGGTAC ACAGCGAATG TATCACCGGT 
GATGTCTTTG GCAGCAAGCG CTGTGATTGC GGTGAGCAGC TGGATATGGC GCTTAATCAA 
ATAGCCAAAG CCGGGCGGGG AGTGCTGCTT TATATGCGGC AGGAAGGCCG CGGCATAGGC 
CTGCATAACA AGCTGTGCGC ATATGCCCTG CAGGACAAGG GTTTGGATAC GGTTGAGGCT 
AACATTGAAC TTGGTTTTGC ACCTGACCTG CGTGAATACG GTATAGGTGC TCAGATACTG 
GTAGATTTGG GCTTAAGTAA AATCCGGATG ATGACCAATA ACCCCAAAAA GGTGGTAGGT 
CTGGAGGGTT ACGGTATTCA GGTAGTTGAG ACCGTGCCTA TTATAGTTGA ACCTAACAGT 
TTTAACCGCC ATTATCTGGA AACCAAACAG AAAAAAATGG GCCATCTGTT AAACGTAGAC 
AAAACAAACT AA 

 

Protein sequence

MPNARVEDAI ADIKAGRFVI VVDDYDRENE GDLVMASEMV TPDAINFMAK NARGLICVSL 
TAERLEQLKI PMMVTENTSP YSTGFTVSVE ARKKVTTGIS AADRAATVQV LIDPAATRED 
IAMPGHMFPL RAREGGVLVR AGHTEASMDL TRMAGLYPSG VLCEIMNDDG TMARLPQLEA 
KAAEWAIKII SVKDIISYRR RTEKMVKKIT EAELPTSHGQ FKAVAYKSQF DADEHIALVM 
GDISGPEPVL VRVHSECITG DVFGSKRCDC GEQLDMALNQ IAKAGRGVLL YMRQEGRGIG 
LHNKLCAYAL QDKGLDTVEA NIELGFAPDL REYGIGAQIL VDLGLSKIRM MTNNPKKVVG 
LEGYGIQVVE TVPIIVEPNS FNRHYLETKQ KKMGHLLNVD KTN