Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DET1042 |
Symbol | rnpA |
ID | 3229665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides ethenogenes 195 |
Kingdom | Bacteria |
Replicon accession | NC_002936 |
Strand | - |
Start bp | 948304 |
End bp | 948666 |
Gene Length | 363 bp |
Protein Length | 120 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637120606 |
Product | ribonuclease P protein component |
Protein accession | YP_181758 |
Protein GI | 57234198 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0594] RNase P protein component |
TIGRFAM ID | [TIGR00188] ribonuclease P protein component, eubacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00401916 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACACT CAAACAGGCT TACCAGACGG GAGGAATATT CCCGGGTGCT TGCCAGCGGC GGTACTTATA TAGGGCAGCT GGCTGTGATG AAAGCTGTGC CTAACAGCCT TGAATTGAGC CGGGTGGGCT TCATTGTAAG CAAAAAAGTA GGCGGGGCTG TAGAGCGTAA CCGGGCTAAA CGGATACTGC GGGAGAGCCT GCGGACTACC GGCCTCAAAC AGGGCTGGGA CATAGTATTT ATAGCTAGGG CAAAAGCGGC TACAGTGAAA TGTGCCGAAA TGGAGAGGGT AGTTAAGCAC TTGCTGGGCA AGGCGCAGAT ACTATCAAAA GCAAATGAAA AAACTAGCTC TAAAGCTGAT TAG
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Protein sequence | MKHSNRLTRR EEYSRVLASG GTYIGQLAVM KAVPNSLELS RVGFIVSKKV GGAVERNRAK RILRESLRTT GLKQGWDIVF IARAKAATVK CAEMERVVKH LLGKAQILSK ANEKTSSKAD
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