Gene DET1001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET1001 
Symbol 
ID3229732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand- 
Start bp913838 
End bp914551 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content50% 
IMG OID637120565 
Producthypothetical protein 
Protein accessionYP_181721 
Protein GI57234265 
COG category[S] Function unknown 
COG ID[COG2120] Uncharacterized proteins, LmbE homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.000144261 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTTCA AAGCTGATGT GTTGGTTATC ATGCCTCATC CGGATGATGC CGAATTCGGG 
GCAGGCGGTA CTATTGCCAA AATGACCGCC GAAGGTAAAA AAGTGGCTTA TGTAGTCTGT 
ACCAATGGGG ATAAAGGCAC TTCTGACCGC AATATGATAC CGTCGGAGCT GATAAAGATA 
CGTGAAGAAG AGCAGCGTCA GGCGGCAGCC GTACTGGGGG TTGGCAGGGT AGTTTTCCTG 
GGCAAACCTG ACCAGGGGCT TGAAAATACG CCTGAACTGC GCAAAGAACT GGTACGCCAG 
ATACGCACTT TCAAACCGTT TACGGTTATT ACTACAGACC CGTATCAGCG TTATATGTGG 
TGGCATAGAG ACCACCGCCA GTGCGGAGAA GCCGTGATGG ACGCTATTTT CCCGTATTCG 
CGTGACCATT TGGCTTACCC TGACCTTATT GCCGAAGGTT TGGAGCCGCA TAAAGTGAGT 
GAGCTTTTGC TTTCAAACCC CCAGGAGCCT AACTATGAGG TTGATATAAG CCAGACGGCC 
ATACTTAAAC TTAAATCCAT TTCCTGCCAT AAAAGCCAGG GCGGAGGCCG GATGGACGAG 
GTTATTTCGG CCTTAAGCGG TAAGAGCGAT ATCAGCGCAT ACGCTGAGAT GTACCCTGAT 
GCCGAAAAGT ATATAAGAAC CGAGTCATTT CACCGGGTGG ATATGTGGTG GTAA
 
Protein sequence
MSFKADVLVI MPHPDDAEFG AGGTIAKMTA EGKKVAYVVC TNGDKGTSDR NMIPSELIKI 
REEEQRQAAA VLGVGRVVFL GKPDQGLENT PELRKELVRQ IRTFKPFTVI TTDPYQRYMW 
WHRDHRQCGE AVMDAIFPYS RDHLAYPDLI AEGLEPHKVS ELLLSNPQEP NYEVDISQTA 
ILKLKSISCH KSQGGGRMDE VISALSGKSD ISAYAEMYPD AEKYIRTESF HRVDMWW