Gene DET0991 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET0991 
SymbolrplJ 
ID3229745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand- 
Start bp909274 
End bp909804 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content49% 
IMG OID637120555 
Product50S ribosomal protein L10 
Protein accessionYP_181714 
Protein GI57234278 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0244] Ribosomal protein L10 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.000204805 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGTAAAAA AGATACGTGA AAAGAAAAAG ATAGCAGTTG ATGAGTTAAC TGACGCTTTA 
GCTGTTGCCC AGTCTGCGGT TTTTACCGAT TACCGCGGTA TCAGTACATC AGAGCTGACT 
ACAATACGCA TGAAGCTGCG TGAAGCTGGT GTAGGTTACC GTGTACTTAA AAATACCCTG 
GCCCGGCGCG CAGCTGACAA CACTGACCAT GCAAATATCA AGAGTGCGTT TGAAGGTCCG 
GTGGCTATGG CTTACTCTTC AAGTGATGTG GTTGCCCCGG CTAAAGTCCT GATGGACTAT 
CTGGCTGGCT CCAAGTCTAC TTTGAAAGTA ACCGGCGGTT ATCTCAGCAA CAAGCTTATT 
TCCGTTGAAG AAGTAGCCGA ACTTGCCAAG TTGCCGTCTC GCGAAGTGCT TATCAGCAAG 
GTTTTGGCTG GTATGCAGAG TCCTATTGCC GGTTTGGCAA TGGTTCTCAA TGGCCCTGCC 
CGTGGTTTGG CCGTGGTACT TCAAGCCCGT ATGAAACAGC TTGAAGGCTA A
 
Protein sequence
MVKKIREKKK IAVDELTDAL AVAQSAVFTD YRGISTSELT TIRMKLREAG VGYRVLKNTL 
ARRAADNTDH ANIKSAFEGP VAMAYSSSDV VAPAKVLMDY LAGSKSTLKV TGGYLSNKLI 
SVEEVAELAK LPSREVLISK VLAGMQSPIA GLAMVLNGPA RGLAVVLQAR MKQLEG