Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DET0787 |
Symbol | glyS |
ID | 3229870 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides ethenogenes 195 |
Kingdom | Bacteria |
Replicon accession | NC_002936 |
Strand | + |
Start bp | 723890 |
End bp | 725191 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637120351 |
Product | glycyl-tRNA synthetase |
Protein accession | YP_181519 |
Protein GI | 57234403 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0423] Glycyl-tRNA synthetase (class II) |
TIGRFAM ID | [TIGR00389] glycyl-tRNA synthetase, dimeric type |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.554245 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAAAA TAGTTTCTTT GGCCCGCCGC CGGGGATTTA TATTCCCCAG CAGTGAAATC TACGGCGGCC TGAATAGCTG CTGGGACTAC GGCCCGCTGG GCGTAGAACT GAAGCGCAAC GTTAAAGAAG CCTGGTGGCG GTATATGGTA CGTGACCGGG ATGACGTGGT TGGTTTGGAT GCCAGTATTA TCATGCACCC CCGCGTTTGG GAAGCCAGCG GTCATGTGGC CGGGTTTTCC GACCCTATGG TGGACTGCAA AAATTGCAAA ATGCGCTGGC GCCCCACAGA CCTTGCCGAA CCCAAATGCC CGGCCTGCGG CGGTGAGCTT ACCGAATCAC GCCAGTTTAA CCTCATGTTT AAAACCTTTA TGGGTCCTGT TGAAGAGGCG GCCAATATTG TCTATCTGCG GCCGGAAACC GCTCAGGGCA TATTTGTAAA TTTTGAAAAC GTTTTAAATA CCACCCGCAA AAAATTGCCC TTCGGTATTG CCCAGATAGG TAAATCGTTC CGCAACGAAA TTACTACCGG TAACTTTATT TTCCGCTCAC GCGAGTTTGA GCAGATGGAA TTGGAGTATT TTGTAAAACC GGGTGCGGAT GATGCCTGCT TGGAGGAATG GACTCAGTAC CGCCTGAACT GGTATAAAAA TCTGGGTATG AATCCTGAAA ACCTCAGGCT TCGGGCTCAC CGCTCTGACG AACTGGCTCA CTATGCCAAG GGTTGTTATG ACGTGGAATA CAATTTCCCC ATGGGCTGGA GTGAGCTTGA AGGTATAGCC AACAGGCGTG ATTTTGACCT TACCCAGCAC TCCAAATACA GCGGCAAGGC ACTGGAGTAT TTTGACGAAG AAACCAAAGA ACACTTTATA CCCTATGTAA TAGAACCCTC AGCCGGGGTT GAACGCTCTA CTCTGGCTTT CCTGATTGAT GCTTATGCCG AAGAGCCTGA CAAGGACGAA ATACGGACTG TTTTGCACCT GCACCCGGCA CTTGCCCCGT ACAAGATAGC CGTCTTGCCT CTTTCCAAGA AAGAAATACT GTCTGATTAT GCCCGCAAGA TTTATGCTGA CCTTAGAAAA TGCTGGATGG TAGCTTACGA TGACTCCCAG AGTATCGGCC GCCGTTACCG CCGTCAGGAC GAAATAGGTA CACCCTACTG CGTTACGGTG GATTTCCAGT CTCTGGAAGA TGGCATGGTG ACCATACGTG ACAGGGATAG CATGGATCAA ATACGGGTAA AAGTATCCGA ACTTAGCTGC ATTCTGGCTG CCAAGCTTTC GGGTGAGCCG TTTAACAGCT GA
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Protein sequence | MDKIVSLARR RGFIFPSSEI YGGLNSCWDY GPLGVELKRN VKEAWWRYMV RDRDDVVGLD ASIIMHPRVW EASGHVAGFS DPMVDCKNCK MRWRPTDLAE PKCPACGGEL TESRQFNLMF KTFMGPVEEA ANIVYLRPET AQGIFVNFEN VLNTTRKKLP FGIAQIGKSF RNEITTGNFI FRSREFEQME LEYFVKPGAD DACLEEWTQY RLNWYKNLGM NPENLRLRAH RSDELAHYAK GCYDVEYNFP MGWSELEGIA NRRDFDLTQH SKYSGKALEY FDEETKEHFI PYVIEPSAGV ERSTLAFLID AYAEEPDKDE IRTVLHLHPA LAPYKIAVLP LSKKEILSDY ARKIYADLRK CWMVAYDDSQ SIGRRYRRQD EIGTPYCVTV DFQSLEDGMV TIRDRDSMDQ IRVKVSELSC ILAAKLSGEP FNS
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