| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET0741 |
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| Symbol | miaA |
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| ID | 3229958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides ethenogenes 195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002936 |
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| Strand | - |
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| Start bp | 682149 |
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| End bp | 683126 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637120305 |
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| Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
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| Protein accession | YP_181476 |
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| Protein GI | 57234491 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
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| TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.066205 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGAGAA CTGACAGCAC CGCCAAAGCA ACCGCCCCAA ATCCGCCCTT AGCGCCTCTA
CTGGTCATTC TGGGCAACAC CGGCTCTGGC AAAAGCGCCT TAGCCCTGAA ACTGGCCAGA
GAAATTCCTG CCGGAATAGT CAATGCGGAT AGCCGCCAGA TATATTCCCA GATGGATATA
GCCACCGCCA AACCCACACC GGCAGAAATG TCAGAAATAC CTCACTACCT GTACAGTTTT
ATCCAGCCTG ACCAGCCTTT CAGCCTGGCG GAATACCAGT CACTGGCTTA TCAGGCCATA
AATAAGCTGC ATACCCAAAA CCGTTTGCCA ATACTGGTTG GGGGAAGCGG TCAATACCTG
AAAGCAGTCC TTGAAGGTTG GAGTATTCCC CAGATAGCCC CTGACGAAAC TTTCCGGGCG
GCCATGTTTG AAAAAGCCGA AAAAGAAGGG GGGGCGTCTA TTTTTGCAGA ACTTGTAAAA
CAAGACCCCC AAGCAGCAGC CAAAATAGAC CCCCGCAATA TCCGCCGGGT TGTACGGGCA
CTGGAGGTTA TAAATAAAAC CGGTGCTGAA TTTTCCAAGC TGCAGACTAA AAACCCGCCT
CCGTACAGAG TACTTAAAAT CGGTATTCAT TTAGCCCGTG AAGAACTTTA CCGCACCGTT
GACTTGCGGG TGGGAAAAAT GTTAGAACAA GGGCTGGAAG CGGAAGTCCG CCATCTGCTG
GAACAGGGCT ATGCGGCTAC TTTACCGTCT ATGTCCGGCA TAGGTTACCG CCAGATAGCC
AAATATATAG GGGGTGAAAT CAGCCTGAGT GAGGCAATTG AGCAAATGCA GTTTGAAACT
CACCGCCTAA TCCGCCAGCA GAATACTTAT TTCCGGCTGG CTGACCCTGA TATACACTGG
ATAACACTGG AAGAAAGCAT GGATAGCGGG ATTATCAATT TAGTCCGTAA TTTCCTGGCT
GACGGAGGAA AAGAATGA
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| Protein sequence | MKRTDSTAKA TAPNPPLAPL LVILGNTGSG KSALALKLAR EIPAGIVNAD SRQIYSQMDI
ATAKPTPAEM SEIPHYLYSF IQPDQPFSLA EYQSLAYQAI NKLHTQNRLP ILVGGSGQYL
KAVLEGWSIP QIAPDETFRA AMFEKAEKEG GASIFAELVK QDPQAAAKID PRNIRRVVRA
LEVINKTGAE FSKLQTKNPP PYRVLKIGIH LAREELYRTV DLRVGKMLEQ GLEAEVRHLL
EQGYAATLPS MSGIGYRQIA KYIGGEISLS EAIEQMQFET HRLIRQQNTY FRLADPDIHW
ITLEESMDSG IINLVRNFLA DGGKE
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