Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DET0736 |
Symbol | |
ID | 3229969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides ethenogenes 195 |
Kingdom | Bacteria |
Replicon accession | NC_002936 |
Strand | - |
Start bp | 677162 |
End bp | 677956 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637120300 |
Product | short chain dehydrogenase/reductase family oxidoreductase |
Protein accession | YP_181471 |
Protein GI | 57234502 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00191984 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCGTAG CCGAGTTATT TGACCTAAGC GGCAAGGTGG CTATTGTAAC CGGTGGTGCA ATGGGTATTG GAAAAGGTAT TTCCATGCGT TTGGCCGAAG CAGGTGCCAG TATAATGATT CCGGACTTAA ACCTTGAAGT CGCCCAAAAG ACCGCAGCTG AAATTAAGGC TCTCGGAGGC AAGGCGGCGG CAATCCAGGC TGATGTAAGT AATATAAGTG ATGCTCAAAA AGTCGTAGAT GCCACCATCA AAGAATTTGG CGACCTGAAT ATTATGGTGA ATAATGCCGG CATTTATCGC TTTATGCCTG CCATAGATAT GACCGAAGCC ATGTGGGATA AAACCCTTGG CATAAATCTT AAAGGGCTTA TGTTTTTCTC ACAGGCAGCC GCCAAAGCCA TGATAGCGGC AAAACACGGC GGTAAGATAA TAAACATTGC CTCTATAGAC GGCTTCCGCC CCACCGGCAA CTTATCTCAT TATGACGCAT CCAAGGGCGG GGTAATAATG CTGACCAAGG CTATGGCACA GGAATGGGCA CCCCATGGCA TACTGGTTAA TGCCGTTGCC CCAGGCGGTA TAAACACTCC CGGCGCTTCC GCGCTGACGC CCAGCGGAAG TATGTCAACC GAACAATTAA TGGAGCTATC AAAATCTTTT GTAGAAAAGC TGCCGCTCAA ACGGATGGGC GAACCGGACG ATATCGGCAA AGTAGTCCTT TTCCTGGCCA GCGCAGCTGC CGATTATATG GTCGGCGGGG TAATTGTAGC TGACGGCGGC GCTCTTCTGG TCTAA
|
Protein sequence | MTVAELFDLS GKVAIVTGGA MGIGKGISMR LAEAGASIMI PDLNLEVAQK TAAEIKALGG KAAAIQADVS NISDAQKVVD ATIKEFGDLN IMVNNAGIYR FMPAIDMTEA MWDKTLGINL KGLMFFSQAA AKAMIAAKHG GKIINIASID GFRPTGNLSH YDASKGGVIM LTKAMAQEWA PHGILVNAVA PGGINTPGAS ALTPSGSMST EQLMELSKSF VEKLPLKRMG EPDDIGKVVL FLASAAADYM VGGVIVADGG ALLV
|
| |