Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DET0628 |
Symbol | |
ID | 3230013 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides ethenogenes 195 |
Kingdom | Bacteria |
Replicon accession | NC_002936 |
Strand | + |
Start bp | 582476 |
End bp | 583795 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637120193 |
Product | radical SAM domain-containing protein |
Protein accession | YP_181370 |
Protein GI | 57234545 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1509] Lysine 2,3-aminomutase |
TIGRFAM ID | [TIGR00238] KamA family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00861881 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCACTA CCGAAGAAAA TAAAAACACA CAATCAGATG ACCCTCTCGG CGCAGGTGCA GTCGAAACTT ATGGCAAGGT AGACGATGAG CCTCCCAGTA GGCTTGGCCA AACAAAAAGA TTTAGACTTA AATATTTCCC CAAAGTAAGT GACCAGAACT GGAATGACTG GCACTGGCAG TTTAAAAACC GTGTTACTTC TGTAACAGAA ATAGCAAGGT TTTTTCATTT GTCTGCAGAA GAATACAGGG ATATGGAGGC CGTTTCTGCG GTTTTCCCCC TTTCCGCCAC CCCTTATTAC CTCAGTCTGG TAGATTTTGA CAATGTAAAT GACCCGGTAA AGTGTCAGCT TATGCCGGAT ACAGCTGAAC TTAATTTTGA TACCCGCTGC TGTTCTGACC CTTTGGAAGA GGCTCATAGT TCGGTAGTGC CTGGGCTGGT ACACCGTTAT CCTGACAGGG TGGTCATGGT GCTGACTGAT ATATGCCCGG TACTGTGCCG CCACTGCACC CGTAAAAGGG AATGGAAAAA CGGCGGTTGG GTGCATACCC AGGCAGAGAT AGATGCCATG CTGGCATATA TACGCCAGCA TCAGGTTATC CGGGACGTAA TTATCTCCGG CGGTGACCCC TTAACCCTGT CTACACCCCG CTTGGAAAGT GTTCTTTCGG CTCTGCGTTC AATACCCCAT GTGGAAATTA TCCGTATAGG TACCCGCTAT CCTGTGGTCT TACCCCAGCG GATAGATGAT GAACTATGCA ATATGCTTTC CAAGTACGGT CCTATCTGGC TTAATACCCA TTATAACCAC CCTAATGAAA TTACCGAAGA ATCCCGTCAG GCCTGTGACC GTCTGGTCAG GGCGGGCGTA CCTGTAAATA ACCAGTCGGT ACTTTTAAAA GGCATAAATG ACAGTGTGTC TGTGCAGAAA TCCCTTTGCC ACAAGCTTTT AATGAGCAAA GTGCGCCCTT ACTACCTTTT CCAGTGTGAC AATGTGCAGG GTACAGAGCA TTTCCATACC CCCATTGAAA CCGGGGTGGG GATTATTGAG GGCTTGCGCG GTTATACCTC CGGTTTGGCT GTGCCGAATT ACGTTATAGA CTTACCGGGT GGCGGCGGCA AAATAACTAT TCAGCCGGAC TACGTGCTGG ATAAACAGGC TGACGAATAT ATAATCCGTA ATTACAAGGG TGATATAATC CGTTTTAAAA ATCCGGGTGA CCCCAAAGTT TACAGCAATA CCGGCCGGAC AGATTTACTT AATAATGCCG CTAAAATAAA GAGAGAAACA GATGCAGATA GGGCTGTCAT ACGATCTTAA
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Protein sequence | MTTTEENKNT QSDDPLGAGA VETYGKVDDE PPSRLGQTKR FRLKYFPKVS DQNWNDWHWQ FKNRVTSVTE IARFFHLSAE EYRDMEAVSA VFPLSATPYY LSLVDFDNVN DPVKCQLMPD TAELNFDTRC CSDPLEEAHS SVVPGLVHRY PDRVVMVLTD ICPVLCRHCT RKREWKNGGW VHTQAEIDAM LAYIRQHQVI RDVIISGGDP LTLSTPRLES VLSALRSIPH VEIIRIGTRY PVVLPQRIDD ELCNMLSKYG PIWLNTHYNH PNEITEESRQ ACDRLVRAGV PVNNQSVLLK GINDSVSVQK SLCHKLLMSK VRPYYLFQCD NVQGTEHFHT PIETGVGIIE GLRGYTSGLA VPNYVIDLPG GGGKITIQPD YVLDKQADEY IIRNYKGDII RFKNPGDPKV YSNTGRTDLL NNAAKIKRET DADRAVIRS
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