Gene DET0620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET0620 
Symbol 
ID3230029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand+ 
Start bp572520 
End bp573659 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content48% 
IMG OID637120185 
Producthypothetical protein 
Protein accessionYP_181362 
Protein GI57234561 
COG category[L] Replication, recombination and repair 
COG ID[COG2887] RecB family exonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.638225 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCCTC TTTCCTACAG CCAGATAGAC CAGTATCAAA GCTGCCCTCT GAAATATCGT 
TTTTTATATA TTGACGGCTT AAAACCGCCG GCAAAGGGGT ATTTCAGTTT CGGCACAACT 
TTGCATGATT GTGCGGAGTA CTTTTTCCGG GTAAAAGTAC CCCCGCCGCC CAGTCTGGAA 
AACCTGATGG AGTATTACTG TTTGCACTGG CGGTCTGAAG GGTATGAGTC TGCTGAGGCA 
GAAGAAAATT ACCGTCAGTT AGGCGGGAAA ATACTGGCAG ACTTCCACCG GATACATAGC 
GCAGATTTTC ATATGCCGCT GGCGGTGGAG CACCAGTACA CTGTAAATCT GGACGGGGTC 
AAGCTAACCG GCAAGATTGA CCGGGTGGAT AAACTCCCTT CCGGCGAACT GTGTATTATA 
GATTATAAAA GCAATAAAGA TTTATTTTCA GCCGAATATG TTCAAAACAA TTTGCAGTTA 
AGCCTTTATC AGCTGGCAGT GGAACAGATT TGGTTTTTGC CGGTAGGTGA GCTTTGTTTG 
TATCACCTGC GCTCCAATAC TGCCATGCGT TGTCCTGCCC GCAGTAAAGA GGTTATTGCC 
GATGCCCGGA ATCTGGTGCT GGAAGTAGCT GAAAAAATAG AAAAAGCTAT TTTCCCTGCC 
TGTGAAAACA GCTTTTGCCC GTGTGATTTT GCCCATCTCT GCCCGCTGTA CCGCCACAAA 
TACGCCCCTC CGCCCCAGTT GCCCCAAGCA CCGCCCGTAG ATATATCCCA CGCGGTTGAG 
GAATATGTGG AACTCCAGTC CCGCAAGGGC GAAATTGAGG CCAGAATAGA CACCCTGAAA 
GAGGCTATTA TTGAGTATTG CCGGGCTAAT TCACTGGGGA GGGTCTTCGG CAGTGAGCAC 
GCGCTTAGCT ACAAGGAAGT TTTGCGGACT GCTTACAACA ATAAAGCTGT ACGTGATTTG 
CTGGAGCCGC TGGGATTGTG GAATCAGGTG TCCAGTTTGG ATAAAACCCT GCTTGAGGAA 
TATCTGGAAA CAGATGCCTG CGGTCAGGAA CTGAAAAAAC GGATACTGGC TTTAAAAGAG 
GTTATTTCCT CCTCTCCGCG GCTGTATGTA AAACAGATTT CAAAAGACCA GGACAACTGA
 
Protein sequence
MRPLSYSQID QYQSCPLKYR FLYIDGLKPP AKGYFSFGTT LHDCAEYFFR VKVPPPPSLE 
NLMEYYCLHW RSEGYESAEA EENYRQLGGK ILADFHRIHS ADFHMPLAVE HQYTVNLDGV 
KLTGKIDRVD KLPSGELCII DYKSNKDLFS AEYVQNNLQL SLYQLAVEQI WFLPVGELCL 
YHLRSNTAMR CPARSKEVIA DARNLVLEVA EKIEKAIFPA CENSFCPCDF AHLCPLYRHK 
YAPPPQLPQA PPVDISHAVE EYVELQSRKG EIEARIDTLK EAIIEYCRAN SLGRVFGSEH 
ALSYKEVLRT AYNNKAVRDL LEPLGLWNQV SSLDKTLLEE YLETDACGQE LKKRILALKE 
VISSSPRLYV KQISKDQDN