| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET0562 |
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| Symbol | atpA |
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| ID | 3230096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides ethenogenes 195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002936 |
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| Strand | + |
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| Start bp | 516254 |
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| End bp | 517765 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637120127 |
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| Product | F0F1 ATP synthase subunit alpha |
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| Protein accession | YP_181305 |
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| Protein GI | 57234628 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0056] F0F1-type ATP synthase, alpha subunit |
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| TIGRFAM ID | [TIGR00962] proton translocating ATP synthase, F1 alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.529195 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGCGCAC GTGGTCAAGA TATAGTATCT ATTATTAAAG AGCAGATAAA AGAATTCGGG
GCTCCGGTCA GTATGACCAG CGTCGGTTCG GTTATCGAAG TAGGCGATGG TATCGCCCGT
ATTCATGGTC TTTCCAACGC CAAGTACAAC GAACTTCTGG AATTTCCCGG CGGTGTTATG
GGCATTGCCC TTAACCTTGA AGAAGACAGC GTAGCCGCTG TTATCCTGGG TGATGATGCC
AATATTAAAG AAGGCGATGA AGTAAAGGCT ACCGGCCGTA TATCTGAAAT TACGGTTGGT
AAAGGTATGA TAGGCCGCGT GGTAGACCCC TTGGGCCGCC CTCTGGACGG CAAAGGTCCT
ATCAAGGCTG AAACAGTCCG TCCTCTTGAA CGCATCGCCC CCAACGTAGT TGACCGTAAA
TCGGTAAATA CCCCGGTTCA GACCGGTATT AAGGCTATTG ATGCCATGAT ACCCATCGGC
CGCGGTCAGC GTGAGCTGAT TATTGGTGAC CGTTCAACCG GTAAAACCGC CATTGCCCTG
GATACCATTA TTAACCAGAA GGGCGGAGAC CTGGTTTGTA TTTATGTGGC TATCGGCCAG
AAAGCTTCTA AAGTAGCCCG GACAGTAGCT TTGCTTGAGC AGTACGGCGC TATGGAGCAC
ACTATTGTGG TTGCGGCCAA CTCTTCTGAT GCGGTTGCTT TGCAGTATCT GGCACCTTAT
GCCGGCTGCG CTATCGGCGA AGAGTTTATG GAACAGGGTC AGGATGCTCT GGTAGTCTAT
GATGACCTTA CCAAGCACGC TTGGGCTTAC CGCCAGCTTT CCCTCCTTCT GCGCCGCCCG
CCCGGCCGTG AGGCTTATCC GGGTGACGTG TTTTACCTGC ACAGCCGGTT GCTGGAACGG
GCTGCCCGCC TTAACGACAA GCTCGGCGGC GGTTCGCTGA CTGCTTTGCC TATTATTGAA
ACTCAGGCCG GAGACGTTTC GGCTTATGTA CCTACCAACG TTATCTCCAT TACTGATGGT
CAGATTTACC TTGAACCTGA TATGTTTAAC TCCGGTATCC GCCCTGCGGT CAACGTAGGT
ATATCGGTAT CCCGAGTAGG TTCAAGCGCC CAGACTAAGG CCATGAAAAA GGTTGCCAGC
AAGCTGAAGA TGGATATGGG TCAGTATCGT GAACTGGCCG CTTTTGCCCA GTTTGGTACT
TCCGAACTGG ATAAAGCTAC CCGTATGCAG CTTGAACGCG GTCAAAGAAT CACCGAGGTA
CTTAAACAGG GACAGTACCA GCCGGTACCT ATGGCTAATC AGGTTGCTAT CCTGTATGCC
GCACTCAACG GGTACCTTGA CAGTGTAGAA GTGGCTAAAG TACGTGATTT TGAAAGCGGG
CTTTATCGCT TCCTTGAAGC GAACTTTGCT TCAGTGCTGA ACAATATCAC CAAGGAAAAT
GCCATCTCTG CTGAAACCGA GACAGCCCTT AAGACCGCTT TGGATGATTA CAAGAAGGGT
TTAGTAGTAT AA
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| Protein sequence | MSARGQDIVS IIKEQIKEFG APVSMTSVGS VIEVGDGIAR IHGLSNAKYN ELLEFPGGVM
GIALNLEEDS VAAVILGDDA NIKEGDEVKA TGRISEITVG KGMIGRVVDP LGRPLDGKGP
IKAETVRPLE RIAPNVVDRK SVNTPVQTGI KAIDAMIPIG RGQRELIIGD RSTGKTAIAL
DTIINQKGGD LVCIYVAIGQ KASKVARTVA LLEQYGAMEH TIVVAANSSD AVALQYLAPY
AGCAIGEEFM EQGQDALVVY DDLTKHAWAY RQLSLLLRRP PGREAYPGDV FYLHSRLLER
AARLNDKLGG GSLTALPIIE TQAGDVSAYV PTNVISITDG QIYLEPDMFN SGIRPAVNVG
ISVSRVGSSA QTKAMKKVAS KLKMDMGQYR ELAAFAQFGT SELDKATRMQ LERGQRITEV
LKQGQYQPVP MANQVAILYA ALNGYLDSVE VAKVRDFESG LYRFLEANFA SVLNNITKEN
AISAETETAL KTALDDYKKG LVV
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