Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DET0538 |
Symbol | |
ID | 3230144 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides ethenogenes 195 |
Kingdom | Bacteria |
Replicon accession | NC_002936 |
Strand | - |
Start bp | 491369 |
End bp | 492649 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637120104 |
Product | ATP-binding protein |
Protein accession | YP_181282 |
Protein GI | 57234675 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1484] DNA replication protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.436507 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGTACCCTG TTTCCGCCGA AGGGGTAACG GATTTTAGCC GGGTAATCCC CTGCCAGTGC ACCCAGACCG AATCCGGTGC GGACAGGGAA AAACGGCTGC TGACCTATAG CTGTCTGGGA GGTCTGCAAA AATACACCTT TGAAAAGCTG AATTCGCTGG GTAAAAGCGA AGAACCGCAT AATCAGAATA TGTTCAGCCA AGCTTACAAT GCCGCCCTGA ACTTTGCTTC CAACCCCGCC GGCTGGCTGG TTTTCAGCGG CCCGAGCGGT GCGGGTAAAA CCCACCTCGC AGCCGCCATT GCCAACAAAC GCCTTGCCAT GGGGCAGCCG GTGCTGTATA AAAGGGCTTC CGAGCTGATA GATGACCTGA AAAAGTCTTT TGAACCTGAC AGCGAGGCTG CTTACAGCCA GAGCTTTGAC ATACTTAAGA ACGCCCCCCT GCTGATAATA GATGACCTTA CCGTCCAGAG CGGTTCGGAC TGGTCAAAAG AAAAACTTGA CCAGTTGCTT ACCTACCGTT TCAGTCAGGA ACTGCCCACT ATTATTACCC TGTCTACACC TATAAACGAG CTTGATTCCC GTATCCAGAG CCGTCTGCTG GATAAATCTG TATCCAGGAT ATATCCGGTT GCCTCAAACC CGGAGGACAC CCTGGAATAC CGCTGGGATA ATGCTCTGGC GCTTCAAAAG AAAATGACCT TTGAAAATTA TGACCACAAG CGTTCAAACC TGCCGCCTGA GCAACGCCAG AATATAGAAG CCGCTTACAA CCTGGCTCTG GAGTTTTCCC GAAACCCCGA AAGCTGGCTG GTTTTTCAAG GAGAAACCGG CTGCGGCAAG ACCCATCTGG CATCTGCCAT TGTCAATGAA CGTTACCGCC AGGGCAAACC CGCCATGTTT GTGGTCGTAC CCGAATTTTT AGACCACCTG CGTTCAACCT TCAGCCCTGA GAGCAAAACC TCTTACGACC AGATGTTTGA TGCGGTTAAA AACGCCAAAC TGCTGGTACT GGATGATTTC GGCGAACAGT CCAGCACCCC CTGGGCTCAG GAAAAACTCT ATCAGGTAAT AAATTACCGC TATAACCGCC GTCTGCCCAC CGTAATTACC ACCAGATGCC CGCTGAGTGA AATAGAGGTA GCCATAAGCT CACGCTTTGT TGATCCCCAG ATAAGCATGG TGTTTAACAT CACTGCCCCT AACTTCCGCT GTGACAGCAC CGGCCAGCAA AAACAGCGCC CGGTATCCCG TATTAACAGG ACTACCCGCC CCCAACGCTA A
|
Protein sequence | MYPVSAEGVT DFSRVIPCQC TQTESGADRE KRLLTYSCLG GLQKYTFEKL NSLGKSEEPH NQNMFSQAYN AALNFASNPA GWLVFSGPSG AGKTHLAAAI ANKRLAMGQP VLYKRASELI DDLKKSFEPD SEAAYSQSFD ILKNAPLLII DDLTVQSGSD WSKEKLDQLL TYRFSQELPT IITLSTPINE LDSRIQSRLL DKSVSRIYPV ASNPEDTLEY RWDNALALQK KMTFENYDHK RSNLPPEQRQ NIEAAYNLAL EFSRNPESWL VFQGETGCGK THLASAIVNE RYRQGKPAMF VVVPEFLDHL RSTFSPESKT SYDQMFDAVK NAKLLVLDDF GEQSSTPWAQ EKLYQVINYR YNRRLPTVIT TRCPLSEIEV AISSRFVDPQ ISMVFNITAP NFRCDSTGQQ KQRPVSRINR TTRPQR
|
| |