Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DET0536 |
Symbol | |
ID | 3230146 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides ethenogenes 195 |
Kingdom | Bacteria |
Replicon accession | NC_002936 |
Strand | + |
Start bp | 489945 |
End bp | 490778 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637120102 |
Product | hypothetical protein |
Protein accession | YP_181280 |
Protein GI | 57234677 |
COG category | [S] Function unknown |
COG ID | [COG1774] Uncharacterized homolog of PSP1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTGATA TTGTAAAGAT ACGCTATAAA CAAGCCGGCA AGATATATTA TTTTGACCCT GCCGGTTTTG AACTTTACCC GTATGACTGT GTAGTGGTGG AAACCAGCCG TGGCGAAGAA CTGGGCTGGG TGGTTGCCTC TCCTTCACAG GTAGAGGAGA GCAGTCTGGA ACAGCCGCTG AAGCCTGTTA TCCGTCTGGC TACCGCTGAA GATATGGCCC GAGAACGCCA GCTGGAAGAG AAAAACCAGA GTGCAGTTTC GGAATGTATA GAGCTGGTAG ACAAGCTGAA TCTGCCCATG AAACTTATCA GGGCGGAATA CAGTCTGGAT GAAAACCACG TAACCATATA TTTTTCAGCC GAAGACAGGG TGGATTTCCG CGAACTGGTC AGGGAGATTT CACGCAAGCT GAGAGTCAGG GTAGAGCTTC GGCAGATTGG CCCGCGGGAT GAGGCCAAGA TGGTGGGCGG TTACGGCCGG TGCGGACGGG AACTTTGCTG CTGCAGTTTC CTGAGTGAGT TTGACCCGGT GTCTATAAAA ATGGCTAAAG AGCAAAATTT GCCGCTAAAT CCCCAGAAGA TTTCAGGTGT TTGCGGCAGG CTTCTTTGCT GCCTTGATTA TGAATATGAA ACCTACAAAG CCGCCAAGGC TAAGATGCCT AAGGACGGGC TGAAGGTAAT CACCCCGGTA GGCAAAGGTG AAGTGGTCGG CGGTAACCCC TTGGAAGAAA TGGTATTTGT TCTGCTGGAA AGCGGGGCTA ACGCCGAAGT GCCTTTGAAG GATATCCGCC CGGATAAAGA AGGCCGCCGT CCTGATGCCT CACTCCACCG CTAA
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Protein sequence | MVDIVKIRYK QAGKIYYFDP AGFELYPYDC VVVETSRGEE LGWVVASPSQ VEESSLEQPL KPVIRLATAE DMARERQLEE KNQSAVSECI ELVDKLNLPM KLIRAEYSLD ENHVTIYFSA EDRVDFRELV REISRKLRVR VELRQIGPRD EAKMVGGYGR CGRELCCCSF LSEFDPVSIK MAKEQNLPLN PQKISGVCGR LLCCLDYEYE TYKAAKAKMP KDGLKVITPV GKGEVVGGNP LEEMVFVLLE SGANAEVPLK DIRPDKEGRR PDASLHR
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