Gene DET0519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET0519 
Symbol 
ID3230180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand- 
Start bp472680 
End bp473777 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content48% 
IMG OID637120085 
ProductABC transporter, permease protein, putative 
Protein accessionYP_181263 
Protein GI57234711 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.180275 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGATTCT GGCAACTGGG TATCCGCGCC CTAAAGGAAA CTTACCGTGA CCCCATGGCT 
CTTGGTTTCC TGCTGGGTTT CCCCCTTATG TTCATGCTTC TTTTCGGTTT TGCTTTCTCC 
GGCGAAGGCA GTGCCAGCTA CCAGATTGGG GTAATAGATG AAGACCAAAC ACCCGTTTCA 
ATTGCCTTTG CAGATGAAGC CCTGCCTAAC GTACCCGCTT ATGAAATCAG CTATATAAAT 
ACCCCTGACG AAGCCCTGAC CAAGCTGAAA CAGTCTGACA TACGGGCATA TATAATAATA 
CCGGCCGGCT TCGGGGAAGA AGTAAACAAA CTCTGGGCGG GTGAAAACGG CAATATATAT 
CTGGACGTGA CCTATGACGA AAGTGATATA CAGGCCGCCG GTGAAATCCT CTCACAGCTG 
AACGCAGTTT GCCGCGCCTT TGCCAAAATA GAAATACCCC TGAGCATAAA TGCCCAGCCG 
GTAAATATTG AAAACAAGAT AACCAACATA GATTTTATCT CCCCCGGCAT TATTGTATTC 
GGGCTGCTCA TCCTTATCCC CACTTCCGCC AGAATAATGG TGCGAGATAA AGAAAAAGGA 
TTTATGTCAA GAATGCTGAC CACTCCCAGC CGTCCCGTGG ACTTTATACT GGGGTATTCG 
CTTAGCATGA CCTTTATCTG TATAATCCAG ATAATATTTT TTATGCTGCT GGGTTACCTG 
TTTGGCATGG ATATAACGGG TAATATAGCT TTGGCTTTCC TGATATTCTT CCTGACCGGG 
CTGTCCAGCA TAGGTATCGG GATGGTGATT GCCGGTTTTT CCAAGAGCGA AAACCAGTCA 
GAATCTATCA GCTGGTTTTT CTCCATGCCG CTGGCCATGG TATCCGGCAC CTGGTTTTCT 
ATCCAGTTTA TGCCGGACAT ACTCAAAGGG CTGGGATACG CCTTCCCCTA CTCCCATGCC 
ATTGAGGCAT CACGCCTGGT AATCCTGCGG GGGGCAGATT TTTCGGCCGT AAGCAGTGAA 
ATAGGCATAC TGGCCGTCTG GACAGTAGCT ATCTTCGCCC TGGGGACAAT AATATTCGGA 
AGGACTATGC GCAGCTGA
 
Protein sequence
MRFWQLGIRA LKETYRDPMA LGFLLGFPLM FMLLFGFAFS GEGSASYQIG VIDEDQTPVS 
IAFADEALPN VPAYEISYIN TPDEALTKLK QSDIRAYIII PAGFGEEVNK LWAGENGNIY 
LDVTYDESDI QAAGEILSQL NAVCRAFAKI EIPLSINAQP VNIENKITNI DFISPGIIVF 
GLLILIPTSA RIMVRDKEKG FMSRMLTTPS RPVDFILGYS LSMTFICIIQ IIFFMLLGYL 
FGMDITGNIA LAFLIFFLTG LSSIGIGMVI AGFSKSENQS ESISWFFSMP LAMVSGTWFS 
IQFMPDILKG LGYAFPYSHA IEASRLVILR GADFSAVSSE IGILAVWTVA IFALGTIIFG 
RTMRS