Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DET0504 |
Symbol | truA |
ID | 3230211 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides ethenogenes 195 |
Kingdom | Bacteria |
Replicon accession | NC_002936 |
Strand | + |
Start bp | 460538 |
End bp | 461284 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637120070 |
Product | tRNA pseudouridine synthase A |
Protein accession | YP_181248 |
Protein GI | 57234742 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0101] Pseudouridylate synthase |
TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00170943 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTATTGG TAATTGAATA CGAGGGTACC CGGTATTCAG GCTTTCAGGT TCAGGATAAA GGGGCCACTA TACAGGGAGA GCTGGAAACA GCTATCCGGA AATTAACAAG TGAACAGACC AGAGTGAGCG GTTCCGGAAG AACTGATGCC GGGGTACACG CGGCTTACCA GGTAGTCAGC TACCTCTCGG AATCTTCACT GGGATTGGAC AAGATAAAGG GCGGGTTAAA TTTTTACCTG CCGCCGGACA TAGCCGTAAA AGAAGTCCAC TTCGTAGCTG AAAGCTTTGA TGTGAGACGC CGGGCTATCA GCCGGGAGTA CTCTTACCAA ATATTAAATA GTAAAACTCG CTCGCCGCTT GCCAGGCTTC AGGCTTGGCA GGTGCCTTAC AAGCTAGATA TAAAGCTAAT GGAACAGGCT TTTAAGATGC TTGAAGGGGA GCATGACTTT ATCGCTTTTG CCTCCAGTCT GGGGCCGGAG ATAAAGAAAA CTGTCCGCCG GGTTAACTGG ACCCGGTTAG GTATTAGGGA GGATAGGCTG ATATTCAATA TAGAGGCCAA TTCCTTTCTT ACCCACCAGG TACGGAATAC TATCGGGACA CTGGTGGAGT TAGGACGCGG GACTATGAGC ATGAGTGAGT TTGAGGCATT ATTTGAGGCT AAAACCCCCG GACTGGCGGG GCCGGCAGCG CCGGCTTGTG GACTGAGCCT CGTTCGGGTA AACTATAGAG AACCTTTTGG GAGTTAA
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Protein sequence | MLLVIEYEGT RYSGFQVQDK GATIQGELET AIRKLTSEQT RVSGSGRTDA GVHAAYQVVS YLSESSLGLD KIKGGLNFYL PPDIAVKEVH FVAESFDVRR RAISREYSYQ ILNSKTRSPL ARLQAWQVPY KLDIKLMEQA FKMLEGEHDF IAFASSLGPE IKKTVRRVNW TRLGIREDRL IFNIEANSFL THQVRNTIGT LVELGRGTMS MSEFEALFEA KTPGLAGPAA PACGLSLVRV NYREPFGS
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