| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET0473 |
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| Symbol | rpsJ |
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| ID | 3230156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides ethenogenes 195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002936 |
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| Strand | + |
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| Start bp | 445463 |
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| End bp | 445771 |
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| Gene Length | 309 bp |
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| Protein Length | 102 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637120039 |
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| Product | 30S ribosomal protein S10 |
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| Protein accession | YP_181217 |
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| Protein GI | 57234687 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0051] Ribosomal protein S10 |
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| TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000156934 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTAAAC AAAAAATCAG GATAAAACTA AAGGGCTTTG ACCACAAGAT ACTTGACCAG
TCTGCGCTGC AGATTGTAGA GGCTCTGGAA CGGACAGGGG CTACCATATC TGGGCCGGTT
CCTCTGCCTA CCCGTATCCA GCGTTACAGC GTCATACGCT CATCCTTCAT TGATAAGGAT
TCACAGGAGC AGTTTGAAAT CAGGACTCAC AAACGTCTTA TTGATATAGT GGAAACTACA
TCCAAGACCA TTGACGCCCT GACCAACCTG AACCTCCCGG CTGGCGTAAG CATAGATATT
AAACTTTAG
|
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| Protein sequence | MTKQKIRIKL KGFDHKILDQ SALQIVEALE RTGATISGPV PLPTRIQRYS VIRSSFIDKD
SQEQFEIRTH KRLIDIVETT SKTIDALTNL NLPAGVSIDI KL
|
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