Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DET0436 |
Symbol | glyA |
ID | 3230231 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides ethenogenes 195 |
Kingdom | Bacteria |
Replicon accession | NC_002936 |
Strand | - |
Start bp | 412092 |
End bp | 413339 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637120002 |
Product | serine hydroxymethyltransferase |
Protein accession | YP_181180 |
Protein GI | 57234762 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.083606 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCTTTT TAAAGACCTC GGACCCGGCA GTTTATAATG CCATAATGCA GGAAACCACC CGCTTAAAAG AAACAATTGA CCTCATTGCT TCGGAAAACT ATACCAGCAA AGCTGTTTTA GAAGCTCAGG GTTCCGTTTT CACCAATAAA TACGCCGAAG GTTACCCCGG TAAAAGATAC TACGCCGGAT GTGAATATGC AGATGCCATA GAAGAGCTGG CTATAGACAG GGCCAAGACC CTGTTCCATG CCGAACACGC CAACGTCCAG CCCCATTCCG GGGCTCAGGC TAACATGGCT GCCTATTTCG CCATGGTAAA ACCCGGTGAT ACCATAATGG GTCTTACCCT TTCCCATGGG GGACACCTGA CCCATGGTTC AAAGGCCAAT TTCACCGGTA AACTTTATCA CGTAATTGAA TACGGGCTGA ATGCCGAAAC CGAACGGATT GATTATGACA ATCTGGAGAA ACTGGCTTTG GAGCATCGCC CCCGCCTGAT TGTTACCGGC GCTTCGGCCT ATCCCCGGAT ACTGGATTTT GAACGTTTCA GAGCTATCTG TGACAAGGTA GACGCCAAGC TGATGGTGGA TATTGCCCAT ATTGCCGGTC TGGTAGCCGC CGGGCTTCAT CCTTCACCCG TACCTTACGC TGACGTGGTT ACCTCTACCA GCCACAAAAC CCTGCGCGGC CCGCGGGGCG GCTTTATCCT CTGCAAAGAG CAATACGCCA AAGCTATTGA CCAGGCAGTA TTCCCGGTAA TACAGGGCGG ACCCCTCATG CAGGTAGTTG CCGCCAAAGC AGTGGCTTTT CAGGAAGCTA TGCAGCCCGG TTTTGTTACT TACCAGAAGA AAATCCTTGA AAATACCCAG GTAATGGCTG AGGAACTCCG CAAACTGGGG CTTCGCCTGG TTTCAGGCGG CACTGACAAC CATTTGGTGC TGGTGGACCT TAGTCCCATC GGGGTAAACG GTTATGATGC CCAGCTGGCA CTGCGCAGAG CCGGTATTGT AATCAACCGC AATACCGTAC CCTTTGCCGA AAACCAGACC GCCAATGTTC CGGCTGGTAT ACGCCTGGGC TGTCCGGCGG CCACCAGCCG CGGATTCGGT CCGGCTGAAA TCCGCCAGAC GGTAAGCTGG ATTGGCAAGA TACTCAAAAA TATAGGCAAC GAAGATATAG AGAAACAGGT GCTGGCTGAG GTAATTCACC TATGCCGCAA ATTCCCTGTT CCCGGCATAG ACGCATAA
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Protein sequence | MSFLKTSDPA VYNAIMQETT RLKETIDLIA SENYTSKAVL EAQGSVFTNK YAEGYPGKRY YAGCEYADAI EELAIDRAKT LFHAEHANVQ PHSGAQANMA AYFAMVKPGD TIMGLTLSHG GHLTHGSKAN FTGKLYHVIE YGLNAETERI DYDNLEKLAL EHRPRLIVTG ASAYPRILDF ERFRAICDKV DAKLMVDIAH IAGLVAAGLH PSPVPYADVV TSTSHKTLRG PRGGFILCKE QYAKAIDQAV FPVIQGGPLM QVVAAKAVAF QEAMQPGFVT YQKKILENTQ VMAEELRKLG LRLVSGGTDN HLVLVDLSPI GVNGYDAQLA LRRAGIVINR NTVPFAENQT ANVPAGIRLG CPAATSRGFG PAEIRQTVSW IGKILKNIGN EDIEKQVLAE VIHLCRKFPV PGIDA
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