| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET0427 |
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| Symbol | |
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| ID | 3230249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides ethenogenes 195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002936 |
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| Strand | + |
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| Start bp | 399337 |
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| End bp | 400875 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637119993 |
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| Product | carbohydrate kinase family protein |
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| Protein accession | YP_181171 |
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| Protein GI | 57234780 |
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| COG category | [G] Carbohydrate transport and metabolism
[S] Function unknown |
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| COG ID | [COG0062] Uncharacterized conserved protein
[COG0063] Predicted sugar kinase |
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| TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00841365 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATATAG TCTCAACTAC CCAGATGCGG CAAATAGAAG AGGCCTGCGT GAAACAGGGT
ATCACCACCG AAACCCTGAT GGACAATGCC GGCAGGGCGG TTGCTGTATT GGCCCGCCAC
CTGCTGGAAA AGCAAAACGG CTGCCGGGTG GTGATACTTG CGGGTGCGGG CAATAACGGG
GGTGACGGGC TGGTTGCCGG GCGTTATCTG GCGGCCTGGG ATAAAAAGGT GAGCATATTC
GAACCCTTTG CGGGTGCTTC AAAAAATAAA ACTGCTTCGG GTGGTTTAAA AACCCCTGAA
AACATATTTA CGGATTTAAC CGGACTTAAG GATCATCTTA GGGAAGCAGA TTTGGTAATA
GATGCTTTGC TGGGTACAGG CGTAAACCGC CCCTTGGAAG GGGTGTACAG GCAAGCCCTG
CAGATGACGG CTGATGTCAA AAATACCAGA CCCGAAATGC AAATACTGGC CTTAGATTTA
TCCTCCGGCC TGAATGCCGA TACCGGGCAG GCGGACGAAG CCTGTTTGAA AGCTGATTTT
ACCCTGTCAC TGGGTATTGC CAAGCAGGGG CTTTTTACCC ACCTCGGGCT GGAATTAAGC
GGGGCGGTTT CGGTGGCGGA TATCGGCATA CCGCTGGGAC TTACAGCTGA TATCCATACC
CGTCTGATTG AAAAAGACTG GGCAAAGGGT GTTTTGCCTG TCCGTTCCCC TCATGCCAAC
AAGGGCAGTT TCGGCCGGGT GATGATTGTG GCGGGGAGTG ACCCTTACAT CGGGGCGGCC
ATGCTTGCCG GAAGTGCCGC CATGCGTATT GGTGCGGGCT TGGTTACCCT GGCGCTGCCT
CAAAGTTTAA CCGGGGCGGT AGCCGCCAAA ATACCCGAAG CTACCTATCT GCCGTTGCCC
GAAGTATCTT GCGGCACTGC GGATAGCTTT GCTTCACGCC TTATCCTGAG TGAACTGGTC
AAATATGACG TGCTTCTGAT AGGGCCGGGC CTGGGGCAAA GTCCATATGC CGCCAGGCTG
GTTACCGAAG TGCTGTCTAA CCTGCCTGAG GAGCTTAAAG TGGTAATAGA CGCTGATGCT
TTAAATATAC TTGCCGCTAT ACCCCGGTGG TGGCTGGAAT ATAGTTTTGA TGCTATACTC
ACTCCGCATC CGGGTGAAAT GGCCCGCCTA GCCAAAACCA CAGCTGAGGC TGTCCAGTCT
GACCGCTTCG GCATTTGCCG TGAATCTGCC CGCAAATGGG GTAAGACCAT TATTCTTAAA
GGTGCCGGAA CAATAGTTTC ATCACCAGAG GGTGAAACCC TGTGCAACCC GGCGGCTAAC
CCGGTACTGG CTTCGGCCGG AACGGGTGAC GTACTGGCCG GAATAATAAG CGGTCTTTTG
GGGCAGGGTT TGAACCTGTT TGAGGCGGCG GGTTTAGGCG TTTATCTGCA CTCGCTAGCT
GGGGCAACTC TGCGGAGTGA AATGGGTGAT GCCGGTGTAC TGGCTTCGGA TCTGCTGTTA
AAATTGCCTG CGGTTATAAA AGAATTGAAA CAGAGCTGA
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| Protein sequence | MYIVSTTQMR QIEEACVKQG ITTETLMDNA GRAVAVLARH LLEKQNGCRV VILAGAGNNG
GDGLVAGRYL AAWDKKVSIF EPFAGASKNK TASGGLKTPE NIFTDLTGLK DHLREADLVI
DALLGTGVNR PLEGVYRQAL QMTADVKNTR PEMQILALDL SSGLNADTGQ ADEACLKADF
TLSLGIAKQG LFTHLGLELS GAVSVADIGI PLGLTADIHT RLIEKDWAKG VLPVRSPHAN
KGSFGRVMIV AGSDPYIGAA MLAGSAAMRI GAGLVTLALP QSLTGAVAAK IPEATYLPLP
EVSCGTADSF ASRLILSELV KYDVLLIGPG LGQSPYAARL VTEVLSNLPE ELKVVIDADA
LNILAAIPRW WLEYSFDAIL TPHPGEMARL AKTTAEAVQS DRFGICRESA RKWGKTIILK
GAGTIVSSPE GETLCNPAAN PVLASAGTGD VLAGIISGLL GQGLNLFEAA GLGVYLHSLA
GATLRSEMGD AGVLASDLLL KLPAVIKELK QS
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