| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET0414 |
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| Symbol | |
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| ID | 3230275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides ethenogenes 195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002936 |
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| Strand | + |
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| Start bp | 390526 |
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| End bp | 391431 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637119980 |
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| Product | hypothetical protein |
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| Protein accession | YP_181159 |
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| Protein GI | 57234806 |
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| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase |
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| TIGRFAM ID | [TIGR00147] lipid kinase, YegS/Rv2252/BmrU family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0557912 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGGTAGCAA AAGTAATAGT TAACCCGGTG GCGGGGGCAA AGTCCACTGA ACAAAAATGG
CCGCATATCA GCAGGCTTAT GTGTGATATG GGCTTTTCTT ATGATTTTCA GTACACCGAA
AGCCAGGGGC ACGCTATTGA GATTGCCCGT GATGCCGCCT TAAACGGTTA TCCTTATCTG
GTAGCGGTGG GCGGTGACGG CACTATTAAC GAAGTAGTTA ACGGTATTCT GACCGCCAGC
CATGACCAAA AAACCCTGAT GGGGGTGGTG GATACCGGCA CCGGCAATGA TTTTGTGCGT
TCGCTGGGCC TTGACGGTAA TTATCTCCAT TCCTGCCAGC ATTTGCTCAG CCCCAAGCAC
ACTTTGGTGG ATGCCGGTCT GGTAACGTTT CAAAAAGACG GCCGTCAGGT CAGCCGCTTC
TTTGTAAACG GAGCAGGGGT GGGCTTTGAT GCCGAGGTGG CAGCTACGAC CGAACATATG
CCTAAAGCTC TGGGCGGCAC TATCCCCTTT GTCATGGCTC TGGCAAAAAC CCTGCTTGGA
TACCGTAATA AAACTGTAGA TATAGGGCTG GATGAAGATA ACTATACCCG GCGTGTTTTA
AGCGTGATTG TAGCCAACGG CAGTTATTTC GGCGGCGGCA TGAAGGTAGC CCCGTCCGCC
CTTATTACTG ACAGCCGGTT TGATGTTATC ACTCTGGGTG ACGTAAACAA GCTGGAAATC
CTGCAAACCT TCCCCAAAAT CTACAAGGGT ACTCATATTA CCCATCCCAA GGTAAAAACC
GAACACGCCC GTTTTGTGAG TATTAGTTCT GAAGAGGGGC TGTATCTTCA GGCAGATGGG
GAGCTTTTAG GTAAAACCCC GGCAACCTTT GAGGTCTTGC CTCAGGCACT TACCATGGTT
TTCTAG
|
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| Protein sequence | MVAKVIVNPV AGAKSTEQKW PHISRLMCDM GFSYDFQYTE SQGHAIEIAR DAALNGYPYL
VAVGGDGTIN EVVNGILTAS HDQKTLMGVV DTGTGNDFVR SLGLDGNYLH SCQHLLSPKH
TLVDAGLVTF QKDGRQVSRF FVNGAGVGFD AEVAATTEHM PKALGGTIPF VMALAKTLLG
YRNKTVDIGL DEDNYTRRVL SVIVANGSYF GGGMKVAPSA LITDSRFDVI TLGDVNKLEI
LQTFPKIYKG THITHPKVKT EHARFVSISS EEGLYLQADG ELLGKTPATF EVLPQALTMV
F
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