Gene DET0413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET0413 
Symbol 
ID3230276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand+ 
Start bp389965 
End bp390438 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content52% 
IMG OID637119979 
Productcytidine/deoxycytidylate deaminase family protein 
Protein accessionYP_181158 
Protein GI57234807 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2131] Deoxycytidylate deaminase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.142884 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCGCC CGAATGCAGA CGAATATTTC CTTAAGATAG CGGCGGTGGT TGCCGAACGT 
TCTACCTGTG TCCGCCATCA TGTCGGGGCG GTAGCCGTAA AGGATAAACA TATTCTCTCC 
ACCGGTTACA ACGGGGCACC GGCCGGTCTG ACAGACTGTC TGGAACTGGG CTGCCTGCGT 
AATCAGAACG GCATACCATC GGGTACCCGC CATGAGATTT GCCGGGCAGT CCATGCCGAA 
CAAAATGTTA TTATCCAGGC GGCTTTGCAT GGCACCAGTC TGGAAGGGGC AACAGTATAT 
GCCACCCATA CCCCCTGTGT GCTGTGTGCC AAAATGCTGA CCAATGCCCG TATCAAACGC 
TACGTCAGCT ACGGCAAATA CGCAGATGAT TCATTTATAG ATATGTTCAA ACAGGCGGGG 
ATAGAGGTAG TTATAAAAGA CCGCCCCCCC GGCATAGTAG AATATCTGGA CTAA
 
Protein sequence
MSRPNADEYF LKIAAVVAER STCVRHHVGA VAVKDKHILS TGYNGAPAGL TDCLELGCLR 
NQNGIPSGTR HEICRAVHAE QNVIIQAALH GTSLEGATVY ATHTPCVLCA KMLTNARIKR 
YVSYGKYADD SFIDMFKQAG IEVVIKDRPP GIVEYLD